| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHCGADDRVDFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPDGVPLPDAPPPSPLYTPPPPSSPYATPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPVPNVYDPANFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9481 | |
| 2 | L | A | 1.9675 | |
| 3 | P | A | 0.6596 | |
| 4 | P | A | 0.3682 | |
| 5 | T | A | 0.1259 | |
| 6 | T | A | 0.1301 | |
| 7 | P | A | 0.1903 | |
| 8 | V | A | 1.2138 | |
| 9 | A | A | 0.0268 | |
| 10 | K | A | -1.1710 | |
| 11 | V | A | -0.4404 | |
| 12 | Q | A | -1.5411 | |
| 13 | S | A | -1.6183 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4531 | |
| 16 | E | A | -2.4554 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4524 | |
| 20 | P | A | 0.1026 | |
| 21 | T | A | 0.1163 | |
| 22 | S | A | -0.1683 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0968 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2804 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8724 | |
| 31 | R | A | -2.6428 | |
| 32 | L | A | -0.7721 | |
| 33 | L | A | 1.2268 | |
| 34 | T | A | 1.4847 | |
| 35 | V | A | 2.0489 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2190 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6619 | |
| 40 | E | A | -1.7329 | |
| 41 | D | A | -0.9579 | |
| 42 | I | A | 0.8508 | |
| 43 | V | A | 1.0221 | |
| 44 | K | A | -1.1770 | |
| 45 | N | A | -1.9287 | |
| 46 | G | A | -1.2258 | |
| 47 | K | A | -0.9277 | |
| 48 | V | A | 1.4973 | |
| 49 | V | A | 2.0799 | |
| 50 | V | A | 1.3166 | |
| 51 | P | A | 0.4931 | |
| 52 | K | A | -0.6442 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1226 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4879 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2956 | |
| 70 | K | A | -1.8107 | |
| 71 | F | A | -0.6659 | |
| 72 | A | A | -0.5741 | |
| 73 | L | A | -0.8638 | |
| 74 | P | A | -1.2601 | |
| 75 | Q | A | -2.4733 | |
| 76 | K | A | -3.0907 | |
| 77 | D | A | -2.9848 | |
| 78 | F | A | -1.6338 | |
| 79 | Y | A | -1.9120 | |
| 80 | D | A | -2.7457 | |
| 81 | P | A | -2.3454 | |
| 82 | E | A | -3.0666 | |
| 83 | K | A | -3.4434 | |
| 84 | E | A | -2.5020 | |
| 85 | R | A | -1.3061 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6189 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9906 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3275 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6754 | |
| 99 | G | A | -0.5406 | |
| 100 | P | A | -0.4262 | |
| 101 | L | A | 0.0082 | |
| 102 | G | A | -0.2087 | |
| 103 | K | A | -0.5948 | |
| 104 | G | A | -0.4692 | |
| 105 | T | A | -0.4455 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1930 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.4201 | |
| 110 | L | A | -0.2862 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3342 | |
| 113 | K | A | -0.6553 | |
| 114 | L | A | -0.6396 | |
| 115 | G | A | -0.7903 | |
| 116 | D | A | -1.4616 | |
| 117 | T | A | -1.2429 | |
| 118 | E | A | -2.6654 | |
| 119 | N | A | -2.3993 | |
| 120 | P | A | -1.5476 | |
| 121 | T | A | -0.7521 | |
| 122 | A | A | -0.3486 | |
| 123 | P | A | -0.0161 | |
| 124 | V | A | 0.0185 | |
| 125 | H | A | -0.7010 | |
| 126 | C | A | -0.8785 | |
| 127 | G | A | -1.2687 | |
| 128 | A | A | -1.2990 | |
| 129 | D | A | -2.2104 | |
| 130 | D | A | -1.7919 | |
| 131 | R | A | -1.5421 | |
| 132 | V | A | -0.7409 | |
| 133 | D | A | -1.4202 | |
| 134 | F | A | -0.6459 | |
| 135 | S | A | -0.4777 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6745 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5735 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2635 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1039 | |
| 157 | D | A | 0.2896 | |
| 158 | I | A | 0.8373 | |
| 159 | A | A | 0.1078 | |
| 160 | E | A | -1.4792 | |
| 161 | P | A | -0.2428 | |
| 162 | C | A | 0.1818 | |
| 163 | P | A | -0.1671 | |
| 164 | G | A | -0.0672 | |
| 165 | L | A | 0.6074 | |
| 166 | P | A | -0.1028 | |
| 167 | P | A | -0.3352 | |
| 168 | G | A | -0.4179 | |
| 169 | A | A | 0.2962 | |
| 170 | C | A | 1.0966 | |
| 171 | P | A | 0.5544 | |
| 172 | P | A | 0.7808 | |
| 173 | I | A | 2.0304 | |
| 174 | Q | A | 0.8332 | |
| 175 | L | A | 1.4145 | |
| 176 | V | A | 0.8114 | |
| 177 | N | A | -0.3618 | |
| 178 | S | A | -0.0106 | |
| 179 | V | A | 0.3656 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3674 | |
| 182 | D | A | 0.0854 | |
| 183 | G | A | -0.1545 | |
| 184 | D | A | -0.5754 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1418 | |
| 190 | F | A | 0.0558 | |
| 191 | G | A | -0.1109 | |
| 192 | N | A | -0.2922 | |
| 193 | M | A | -0.1687 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4028 | |
| 197 | E | A | -2.6111 | |
| 198 | L | A | -1.2216 | |
| 199 | Q | A | -2.5440 | |
| 200 | Q | A | -3.3395 | |
| 201 | D | A | -3.6036 | |
| 202 | R | A | -3.3373 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1950 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3801 | |
| 211 | S | A | -1.9335 | |
| 212 | T | A | -1.4953 | |
| 213 | R | A | -2.1886 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1783 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2800 | |
| 220 | L | A | 0.4499 | |
| 221 | K | A | -1.4036 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9197 | |
| 224 | N | A | -1.6004 | |
| 225 | E | A | -1.3335 | |
| 226 | A | A | -0.6760 | |
| 227 | Y | A | -0.4113 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7193 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0844 | |
| 234 | F | A | 0.2692 | |
| 235 | G | A | -0.8183 | |
| 236 | R | A | -2.6076 | |
| 237 | R | A | -2.8754 | |
| 238 | E | A | -2.0748 | |
| 239 | Q | A | -0.1280 | |
| 240 | V | A | 1.4926 | |
| 241 | Y | A | 1.1438 | |
| 242 | A | A | 0.0817 | |
| 243 | R | A | -1.4224 | |
| 244 | H | A | -1.2875 | |
| 245 | F | A | -0.3025 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5876 | |
| 249 | C | A | -0.8928 | |
| 250 | G | A | -0.9489 | |
| 251 | P | A | -0.5192 | |
| 252 | D | A | -0.3884 | |
| 253 | G | A | 0.0616 | |
| 254 | V | A | 1.3051 | |
| 255 | P | A | 0.1087 | |
| 256 | L | A | 0.4002 | |
| 257 | P | A | -0.3669 | |
| 258 | D | A | -1.7012 | |
| 259 | A | A | -0.7859 | |
| 260 | P | A | -0.9732 | |
| 261 | P | A | -0.6165 | |
| 262 | P | A | -0.3131 | |
| 263 | S | A | -0.1821 | |
| 264 | P | A | 0.4274 | |
| 265 | L | A | 1.3804 | |
| 266 | Y | A | 0.7440 | |
| 267 | T | A | 0.1209 | |
| 268 | P | A | -0.2851 | |
| 269 | P | A | -0.1845 | |
| 270 | P | A | -0.4249 | |
| 271 | P | A | -0.4282 | |
| 272 | S | A | -0.3633 | |
| 273 | S | A | -0.1609 | |
| 274 | P | A | -0.0808 | |
| 275 | Y | A | 0.4278 | |
| 276 | A | A | 0.0575 | |
| 277 | T | A | -0.0650 | |
| 278 | P | A | 0.0302 | |
| 279 | P | A | -0.2728 | |
| 280 | P | A | -0.3171 | |
| 281 | T | A | -0.1806 | |
| 282 | D | A | -0.7524 | |
| 283 | Y | A | 0.7685 | |
| 284 | F | A | 0.6583 | |
| 285 | G | A | 0.0879 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9344 | |
| 291 | L | A | 1.6620 | |
| 292 | V | A | 0.6846 | |
| 293 | S | A | -0.1422 | |
| 294 | S | A | -0.9661 | |
| 295 | D | A | -1.8363 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1443 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6768 | |
| 301 | R | A | -1.9728 | |
| 302 | P | A | -1.0143 | |
| 303 | F | A | -0.1832 | |
| 304 | W | A | -0.5231 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0763 | |
| 307 | R | A | -2.8351 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2672 | |
| 310 | G | A | -1.2279 | |
| 311 | N | A | -1.3209 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9558 | |
| 319 | N | A | -0.9026 | |
| 320 | E | A | -1.0592 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3371 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1517 | |
| 333 | N | A | 0.4080 | |
| 334 | F | A | 1.4381 | |
| 335 | T | A | 0.6133 | |
| 336 | I | A | 0.3726 | |
| 337 | S | A | -1.0075 | |
| 338 | Q | A | -1.7770 | |
| 339 | Q | A | -1.2029 | |
| 340 | L | A | 0.5312 | |
| 341 | S | A | 0.3310 | |
| 342 | T | A | 0.0982 | |
| 343 | P | A | -0.0822 | |
| 344 | V | A | 0.6888 | |
| 345 | P | A | 0.0930 | |
| 346 | N | A | -0.1184 | |
| 347 | V | A | 1.5798 | |
| 348 | Y | A | 1.4557 | |
| 349 | D | A | -0.1101 | |
| 350 | P | A | -0.5999 | |
| 351 | A | A | -0.3120 | |
| 352 | N | A | -0.1473 | |
| 353 | F | A | -0.8726 | |
| 354 | K | A | -1.9636 | |
| 355 | N | A | -1.8251 | |
| 356 | Y | A | -0.1650 | |
| 357 | L | A | 0.5600 | |
| 358 | R | A | 0.9212 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4911 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0073 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9249 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6640 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3091 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3290 | |
| 376 | L | A | -1.7663 | |
| 377 | D | A | -2.0613 | |
| 378 | P | A | -1.0768 | |
| 379 | G | A | -1.0288 | |
| 380 | V | A | -0.9384 | |
| 381 | L | A | -0.5495 | |
| 382 | A | A | -0.6657 | |
| 383 | H | A | -0.8580 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4036 | |
| 386 | T | A | -0.5794 | |
| 387 | M | A | -0.3360 | |
| 388 | N | A | -0.8708 | |
| 389 | P | A | -1.2893 | |
| 390 | T | A | -1.5941 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5605 | |
| 393 | E | A | -3.1687 | |
| 394 | N | A | -2.9751 | |
| 395 | W | A | -1.5567 | |
| 396 | N | A | -1.3686 | |
| 397 | L | A | -0.2409 | |
| 398 | G | A | 0.5255 | |
| 399 | F | A | 2.4337 | |
| 400 | V | A | 2.0460 | |
| 401 | P | A | 0.0548 | |
| 402 | P | A | -1.9141 | |
| 403 | K | A | -3.6064 | |
| 404 | E | A | -4.1188 | |
| 405 | R | A | -4.4421 | |
| 406 | E | A | -4.0062 | |
| 407 | D | A | -2.9733 | |
| 408 | P | A | -1.8207 | |
| 409 | Y | A | -0.9954 | |
| 410 | K | A | -2.0981 | |
| 411 | G | A | -0.6379 | |
| 412 | L | A | 0.6533 | |
| 413 | I | A | 1.5823 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3717 | |
| 416 | E | A | -1.6174 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9188 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0679 | |
| 421 | E | A | -2.7900 | |
| 422 | R | A | -2.5838 | |
| 423 | F | A | -1.3030 | |
| 424 | S | A | -1.4699 | |
| 425 | Q | A | -1.7903 | |
| 426 | D | A | -2.9020 | |
| 427 | L | A | -2.0056 | |
| 428 | D | A | -2.7890 | |
| 429 | Q | A | -2.6217 | |
| 430 | F | A | -1.4477 | |
| 431 | A | A | -0.9187 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6376 | |
| 435 | K | A | -0.7662 | |
| 436 | F | A | 0.1415 | |
| 437 | L | A | 1.0175 | |
| 438 | Y | A | 0.8094 | |
| 439 | Q | A | -0.2794 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine