| Chain sequence(s) |
A: EVQLQASGGGLVQPGGSLRLSCTASGSIFSINAMGWYRQTPRKERELVAAISEGGSTKYGDSVKGRFTISRDFAKNTQMVYLQMNSLKAEDTAVYYCKAQTEGPIADWGTSQYEYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:06)
[INFO] Main: Simulation completed successfully. (00:03:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1162 | |
| 2 | V | A | -1.2044 | |
| 3 | Q | A | -1.7717 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.7252 | |
| 6 | A | A | -1.2011 | |
| 7 | S | A | -1.2090 | |
| 8 | G | A | -0.9437 | |
| 9 | G | A | -0.7420 | |
| 10 | G | A | 0.0132 | |
| 11 | L | A | 1.0608 | |
| 12 | V | A | 0.0283 | |
| 13 | Q | A | -1.2544 | |
| 14 | P | A | -1.5274 | |
| 15 | G | A | -1.3554 | |
| 16 | G | A | -0.9124 | |
| 17 | S | A | -1.3157 | |
| 18 | L | A | -1.1010 | |
| 19 | R | A | -2.2593 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8513 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -0.7572 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.2930 | |
| 26 | G | A | -1.1493 | |
| 27 | S | A | -0.3112 | |
| 28 | I | A | 0.5558 | |
| 29 | F | A | 1.6285 | |
| 30 | S | A | 0.1187 | |
| 31 | I | A | 0.0000 | |
| 32 | N | A | -1.8961 | |
| 33 | A | A | -1.5687 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.2529 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -2.1546 | |
| 40 | T | A | -2.3106 | |
| 41 | P | A | -1.9964 | |
| 42 | R | A | -3.2394 | |
| 43 | K | A | -3.7542 | |
| 44 | E | A | -3.6783 | |
| 45 | R | A | -2.8668 | |
| 46 | E | A | -1.6632 | |
| 47 | L | A | -0.6626 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | -0.5828 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | -1.8944 | |
| 53 | E | A | -2.3626 | |
| 54 | G | A | -1.7179 | |
| 55 | G | A | -1.6850 | |
| 56 | S | A | -1.3269 | |
| 57 | T | A | -1.3254 | |
| 58 | K | A | -2.0366 | |
| 59 | Y | A | -1.5281 | |
| 60 | G | A | -1.6272 | |
| 61 | D | A | -2.6074 | |
| 62 | S | A | -1.8320 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.7921 | |
| 65 | G | A | -1.7428 | |
| 66 | R | A | -1.3842 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -1.1341 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.4198 | |
| 71 | R | A | -0.5986 | |
| 72 | D | A | -0.5820 | |
| 73 | F | A | 0.1965 | |
| 74 | A | A | -0.6283 | |
| 75 | K | A | -2.0674 | |
| 76 | N | A | -1.9846 | |
| 77 | T | A | -1.0690 | |
| 78 | Q | A | -0.7534 | |
| 79 | M | A | -0.2691 | |
| 80 | V | A | 0.0000 | |
| 81 | Y | A | -0.6965 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -1.6152 | |
| 84 | M | A | 0.0000 | |
| 85 | N | A | -1.4338 | |
| 86 | S | A | -1.2128 | |
| 87 | L | A | 0.0000 | |
| 88 | K | A | -2.2768 | |
| 89 | A | A | -1.7145 | |
| 90 | E | A | -2.2745 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -0.8519 | |
| 93 | A | A | 0.0000 | |
| 94 | V | A | -0.4742 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | -0.5003 | |
| 97 | C | A | 0.0000 | |
| 98 | K | A | -0.4110 | |
| 99 | A | A | 0.0000 | |
| 100 | Q | A | -1.3881 | |
| 101 | T | A | 0.0000 | |
| 102 | E | A | -1.0161 | |
| 103 | G | A | 0.0000 | |
| 104 | P | A | 0.3466 | |
| 105 | I | A | 1.2480 | |
| 106 | A | A | 0.3342 | |
| 107 | D | A | -0.8210 | |
| 108 | W | A | 0.5456 | |
| 109 | G | A | 0.0610 | |
| 110 | T | A | -0.1245 | |
| 111 | S | A | -0.4340 | |
| 112 | Q | A | -1.5870 | |
| 113 | Y | A | -0.8214 | |
| 114 | E | A | -1.2475 | |
| 115 | Y | A | -0.1834 | |
| 116 | W | A | -0.3435 | |
| 117 | G | A | -0.8778 | |
| 118 | Q | A | -1.4741 | |
| 119 | G | A | -0.9914 | |
| 120 | T | A | -1.0369 | |
| 121 | Q | A | -0.9754 | |
| 122 | V | A | 0.0000 | |
| 123 | T | A | -0.2316 | |
| 124 | V | A | 0.0000 | |
| 125 | S | A | -0.6002 |