| Chain sequence(s) |
B: LLAADERAAAELEAAAAAAMPALLAEGVTRVRWMSSPDEVIETHTLVRLP
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.6151 | |
| 2 | L | B | 0.9495 | |
| 3 | A | B | -0.4475 | |
| 4 | A | B | -1.0336 | |
| 5 | D | B | -2.4780 | |
| 6 | E | B | -3.0045 | |
| 7 | R | B | -3.5189 | |
| 8 | A | B | -2.3628 | |
| 9 | A | B | -2.2378 | |
| 10 | A | B | -2.4388 | |
| 11 | E | B | -2.5295 | |
| 12 | L | B | -0.6729 | |
| 13 | E | B | -1.7561 | |
| 14 | A | B | -0.8598 | |
| 15 | A | B | -0.3323 | |
| 16 | A | B | -0.2837 | |
| 17 | A | B | -0.3068 | |
| 18 | A | B | 0.1131 | |
| 19 | A | B | 0.1115 | |
| 20 | M | B | 0.3540 | |
| 21 | P | B | -0.3087 | |
| 22 | A | B | -0.1431 | |
| 23 | L | B | -0.3664 | |
| 24 | L | B | -0.2508 | |
| 25 | A | B | -0.9251 | |
| 26 | E | B | -1.6137 | |
| 27 | G | B | -1.1647 | |
| 28 | V | B | -0.4843 | |
| 29 | T | B | -0.7422 | |
| 30 | R | B | -1.8793 | |
| 31 | V | B | -1.4388 | |
| 32 | R | B | -1.6986 | |
| 33 | W | B | 0.3590 | |
| 34 | M | B | 0.1992 | |
| 35 | S | B | -0.3828 | |
| 36 | S | B | -0.8453 | |
| 37 | P | B | -1.2968 | |
| 38 | D | B | -2.3624 | |
| 39 | E | B | -2.0310 | |
| 40 | V | B | -0.0543 | |
| 41 | I | B | 0.6362 | |
| 42 | E | B | -0.7579 | |
| 43 | T | B | -1.1667 | |
| 44 | H | B | -1.4276 | |
| 45 | T | B | -0.8612 | |
| 46 | L | B | 0.2723 | |
| 47 | V | B | 1.0429 | |
| 48 | R | B | -0.1696 | |
| 49 | L | B | 1.0402 | |
| 50 | P | B | 0.2528 |