Project name: GKGHKGH8

Status: done

Started: 2026-02-23 04:49:18
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Chain sequence(s) A: GKGHKGH
C: GKGHKGH
B: GKGHKGH
E: GKGHKGH
D: GKGHKGH
G: GKGHKGH
F: GKGHKGH
H: GKGHKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:42)
Show buried residues

Minimal score value
-5.3752
Maximal score value
0.0
Average score
-3.2959
Total score value
-184.5703

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.8214
2 K A -2.5068
3 G A -3.5739
4 H A -4.8062
5 K A -5.3752
6 G A 0.0000
7 H A -4.9150
1 G B 0.0000
2 K B -5.1036
3 G B -4.3108
4 H B -4.4077
5 K B -3.5782
6 G B -2.3841
7 H B -2.5275
1 G C -3.4983
2 K C -3.8934
3 G C 0.0000
4 H C 0.0000
5 K C -5.2444
6 G C 0.0000
7 H C -3.4321
1 G D -4.4031
2 K D -5.2752
3 G D -4.4276
4 H D -4.3974
5 K D -3.8314
6 G D -2.6653
7 H D -2.9550
1 G E -2.6003
2 K E -3.5391
3 G E -2.6397
4 H E -3.1164
5 K E -4.3622
6 G E -3.6877
7 H E -3.4042
1 G F -2.0750
2 K F -3.3951
3 G F -3.8232
4 H F -4.5756
5 K F -5.0729
6 G F -4.5994
7 H F -3.7305
1 G G -1.6031
2 K G -2.6973
3 G G -2.9879
4 H G -3.7363
5 K G -3.3767
6 G G -2.2814
7 H G -2.4148
1 G H -3.2799
2 K H -3.8951
3 G H -4.6999
4 H H -4.3433
5 K H -4.3515
6 G H -2.8660
7 H H -2.0822
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Laboratory of Theory of Biopolymers 2018