Project name: query_structure

Status: done

Started: 2026-03-17 00:56:35
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Chain sequence(s) A: QVQLVESGGGSVQAGGSLRLSCTASGGSEYSYSTFSCGWFRQAPGQEREAVAAIASMGGLTYYADSVKGRFTISRDNAKNTCTLQMNNLKPEDTAIYYCAAVRGYFMRLPSSHNFRYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:16)
Show buried residues

Minimal score value
-3.4109
Maximal score value
1.9991
Average score
-0.8212
Total score value
-105.1104

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.4766
2 V A -1.0597
3 Q A -1.2872
4 L A 0.0000
5 V A 0.2144
6 E A -0.4750
7 S A -0.7951
8 G A -1.3316
9 G A -1.2183
10 G A -0.9349
11 S A -0.7067
12 V A -0.7531
13 Q A -1.7255
14 A A -1.8543
15 G A -1.7991
16 G A -1.4046
17 S A -1.4581
18 L A -1.2535
19 R A -2.1277
20 L A 0.0000
21 S A -0.6579
22 C A 0.0000
23 T A -0.4954
24 A A 0.0000
25 S A -0.8490
26 G A -1.3575
27 G A -1.5063
28 S A -1.3115
29 E A -2.0145
30 Y A -1.4643
31 S A -1.3470
32 Y A 0.0000
33 S A -0.8041
34 T A -0.5804
35 F A 0.0000
36 S A 0.0000
37 C A 0.0000
38 G A 0.0000
39 W A 0.0000
40 F A 0.0000
41 R A -1.3476
42 Q A -1.9457
43 A A -1.7835
44 P A -1.2485
45 G A -1.7392
46 Q A -2.8761
47 E A -3.4109
48 R A -2.9107
49 E A -1.9729
50 A A -0.6393
51 V A 0.0000
52 A A 0.0000
53 A A 0.0000
54 I A 0.0000
55 A A 0.0000
56 S A 0.0000
57 M A 0.9018
58 G A 0.0097
59 G A 0.1257
60 L A 0.8738
61 T A 0.3861
62 Y A 0.1589
63 Y A -0.5111
64 A A -1.3012
65 D A -2.3941
66 S A -1.8067
67 V A 0.0000
68 K A -2.5438
69 G A -1.8654
70 R A -1.6862
71 F A 0.0000
72 T A -0.7491
73 I A 0.0000
74 S A -0.5843
75 R A -1.0707
76 D A -1.8154
77 N A -1.8292
78 A A -1.5186
79 K A -2.2943
80 N A -1.6252
81 T A -1.1344
82 C A 0.0000
83 T A -0.7816
84 L A 0.0000
85 Q A -1.0798
86 M A 0.0000
87 N A -1.8140
88 N A -2.2695
89 L A 0.0000
90 K A -2.5447
91 P A -1.8607
92 E A -2.3001
93 D A 0.0000
94 T A -1.1015
95 A A 0.0000
96 I A -0.4851
97 Y A 0.0000
98 Y A 0.0000
99 C A 0.0000
100 A A 0.0000
101 A A 0.0000
102 V A -1.1010
103 R A -1.7378
104 G A 0.0990
105 Y A 1.7493
106 F A 1.9991
107 M A 0.0000
108 R A -0.5541
109 L A 0.6874
110 P A 0.0227
111 S A -0.7316
112 S A -1.2739
113 H A -1.6428
114 N A -1.6694
115 F A 0.0000
116 R A -2.1771
117 Y A -0.8554
118 W A -0.2873
119 G A -0.4328
120 Q A -1.1028
121 G A -0.7667
122 T A -0.9010
123 Q A -1.3022
124 V A 0.0000
125 T A -0.9282
126 V A 0.0000
127 S A -1.1365
128 S A -0.8477
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Laboratory of Theory of Biopolymers 2018