Chain sequence(s) |
A: SQPQQPISQQQQQQQQQQQQQQQQI
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:24) [INFO] Main: Simulation completed successfully. (00:00:24) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | S | A | -1.2383 | |
2 | Q | A | -1.8611 | |
3 | P | A | -1.6544 | |
4 | Q | A | -2.0290 | |
5 | Q | A | -2.0462 | |
6 | P | A | -1.2814 | |
7 | I | A | -0.5298 | |
8 | S | A | -1.8226 | |
9 | Q | A | -2.7465 | |
10 | Q | A | -3.0656 | |
11 | Q | A | -3.3219 | |
12 | Q | A | -3.8630 | |
13 | Q | A | -4.3644 | |
14 | Q | A | -4.6970 | |
15 | Q | A | -4.9130 | |
16 | Q | A | -5.0380 | |
17 | Q | A | -5.1175 | |
18 | Q | A | -5.1211 | |
19 | Q | A | -5.0305 | |
20 | Q | A | -4.8741 | |
21 | Q | A | -4.5855 | |
22 | Q | A | -4.1463 | |
23 | Q | A | -3.7858 | |
24 | Q | A | -3.1852 |