| Chain sequence(s) |
B: SAELDKMIEDYEKAAKIAEEWAKKYPELKEHLEKFKEFMEKKKKELEEKK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:57)
[INFO] Main: Simulation completed successfully. (00:02:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.7106 | |
| 2 | A | B | -1.9717 | |
| 3 | E | B | -3.0632 | |
| 4 | L | B | -3.1432 | |
| 5 | D | B | -3.8175 | |
| 6 | K | B | -3.8730 | |
| 7 | M | B | -2.8885 | |
| 8 | I | B | -3.7994 | |
| 9 | E | B | -4.0388 | |
| 10 | D | B | -3.9159 | |
| 11 | Y | B | -2.8740 | |
| 12 | E | B | -3.5260 | |
| 13 | K | B | -3.0585 | |
| 14 | A | B | -1.8397 | |
| 15 | A | B | 0.0000 | |
| 16 | K | B | -2.3369 | |
| 17 | I | B | -0.0960 | |
| 18 | A | B | 0.0000 | |
| 19 | E | B | -2.3763 | |
| 20 | E | B | -1.9458 | |
| 21 | W | B | -1.2808 | |
| 22 | A | B | 0.0000 | |
| 23 | K | B | -2.8794 | |
| 24 | K | B | -2.6856 | |
| 25 | Y | B | -1.6434 | |
| 26 | P | B | -2.1873 | |
| 27 | E | B | -2.5603 | |
| 28 | L | B | -2.3084 | |
| 29 | K | B | -3.7126 | |
| 30 | E | B | -3.7557 | |
| 31 | H | B | -3.2736 | |
| 32 | L | B | -2.7591 | |
| 33 | E | B | -3.7106 | |
| 34 | K | B | -3.4017 | |
| 35 | F | B | -1.8158 | |
| 36 | K | B | -2.8817 | |
| 37 | E | B | -3.0061 | |
| 38 | F | B | -1.2172 | |
| 39 | M | B | -2.5291 | |
| 40 | E | B | -3.1102 | |
| 41 | K | B | -3.3677 | |
| 42 | K | B | -3.1476 | |
| 43 | K | B | -4.3815 | |
| 44 | K | B | -4.8587 | |
| 45 | E | B | -4.9250 | |
| 46 | L | B | -4.2493 | |
| 47 | E | B | -5.3626 | |
| 48 | E | B | -5.1213 | |
| 49 | K | B | -4.5633 | |
| 50 | K | B | -4.6001 |