| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDYYYITYGETGGNSPVQEFEVPGSKSTATISGLKPGVDYTITVYAIDDLPYEHWPSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:23)
[INFO] Main: Simulation completed successfully. (00:01:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8093 | |
| 2 | S | A | 0.8163 | |
| 3 | S | A | 0.5768 | |
| 4 | V | A | 0.2994 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.5785 | |
| 7 | K | A | -2.5608 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.7864 | |
| 10 | V | A | 0.1495 | |
| 11 | V | A | 1.5651 | |
| 12 | A | A | 0.9075 | |
| 13 | A | A | 0.2974 | |
| 14 | T | A | -0.5323 | |
| 15 | P | A | -1.1307 | |
| 16 | T | A | -1.0039 | |
| 17 | S | A | -0.5346 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7607 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9127 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.5636 | |
| 24 | A | A | -1.2090 | |
| 25 | P | A | 0.0492 | |
| 26 | A | A | 0.4827 | |
| 27 | V | A | 0.5183 | |
| 28 | T | A | -0.3908 | |
| 29 | V | A | -0.9068 | |
| 30 | D | A | -1.9345 | |
| 31 | Y | A | -1.3901 | |
| 32 | Y | A | 0.0000 | |
| 33 | Y | A | -0.3903 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.5709 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4124 | |
| 39 | T | A | -1.2038 | |
| 40 | G | A | -1.2031 | |
| 41 | G | A | -1.3576 | |
| 42 | N | A | -1.5019 | |
| 43 | S | A | -0.7557 | |
| 44 | P | A | -0.2360 | |
| 45 | V | A | 0.5540 | |
| 46 | Q | A | -0.6222 | |
| 47 | E | A | -1.7540 | |
| 48 | F | A | -1.2760 | |
| 49 | E | A | -1.7209 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.4157 | |
| 52 | G | A | -1.4622 | |
| 53 | S | A | -1.3556 | |
| 54 | K | A | -2.0066 | |
| 55 | S | A | -1.3951 | |
| 56 | T | A | -0.7457 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2397 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6568 | |
| 61 | G | A | -1.0285 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3502 | |
| 64 | P | A | -1.6485 | |
| 65 | G | A | -1.4398 | |
| 66 | V | A | -1.3684 | |
| 67 | D | A | -2.0712 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7971 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.0682 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.4620 | |
| 74 | A | A | 0.0000 | |
| 75 | I | A | -0.4107 | |
| 76 | D | A | -1.1965 | |
| 77 | D | A | -1.5809 | |
| 78 | L | A | -0.1560 | |
| 79 | P | A | -0.1284 | |
| 80 | Y | A | 0.3103 | |
| 81 | E | A | -1.1834 | |
| 82 | H | A | -0.8497 | |
| 83 | W | A | 0.3371 | |
| 84 | P | A | 0.1491 | |
| 85 | S | A | 0.1930 | |
| 86 | P | A | 0.3860 | |
| 87 | I | A | 0.1406 | |
| 88 | S | A | -0.3301 | |
| 89 | I | A | -0.7199 | |
| 90 | N | A | -1.7358 | |
| 91 | Y | A | -1.4590 | |
| 92 | R | A | -2.5248 | |
| 93 | T | A | -1.6424 |