Project name: query_structure

Status: done

Started: 2026-03-17 01:24:19
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDYYYITYGETGGNSPVQEFEVPGSKSTATISGLKPGVDYTITVYAIDDLPYEHWPSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:25)
Show buried residues

Minimal score value
-2.5636
Maximal score value
1.8093
Average score
-0.5931
Total score value
-55.1627

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.8093
2 S A 0.8163
3 S A 0.5768
4 V A 0.2994
5 P A 0.0000
6 T A -1.5785
7 K A -2.5608
8 L A 0.0000
9 E A -1.7864
10 V A 0.1495
11 V A 1.5651
12 A A 0.9075
13 A A 0.2974
14 T A -0.5323
15 P A -1.1307
16 T A -1.0039
17 S A -0.5346
18 L A 0.0000
19 L A 0.7607
20 I A 0.0000
21 S A -0.9127
22 W A 0.0000
23 D A -2.5636
24 A A -1.2090
25 P A 0.0492
26 A A 0.4827
27 V A 0.5183
28 T A -0.3908
29 V A -0.9068
30 D A -1.9345
31 Y A -1.3901
32 Y A 0.0000
33 Y A -0.3903
34 I A 0.0000
35 T A -0.5709
36 Y A 0.0000
37 G A 0.0000
38 E A -1.4124
39 T A -1.2038
40 G A -1.2031
41 G A -1.3576
42 N A -1.5019
43 S A -0.7557
44 P A -0.2360
45 V A 0.5540
46 Q A -0.6222
47 E A -1.7540
48 F A -1.2760
49 E A -1.7209
50 V A 0.0000
51 P A -1.4157
52 G A -1.4622
53 S A -1.3556
54 K A -2.0066
55 S A -1.3951
56 T A -0.7457
57 A A 0.0000
58 T A 0.2397
59 I A 0.0000
60 S A -0.6568
61 G A -1.0285
62 L A 0.0000
63 K A -2.3502
64 P A -1.6485
65 G A -1.4398
66 V A -1.3684
67 D A -2.0712
68 Y A 0.0000
69 T A -0.7971
70 I A 0.0000
71 T A -0.0682
72 V A 0.0000
73 Y A 0.4620
74 A A 0.0000
75 I A -0.4107
76 D A -1.1965
77 D A -1.5809
78 L A -0.1560
79 P A -0.1284
80 Y A 0.3103
81 E A -1.1834
82 H A -0.8497
83 W A 0.3371
84 P A 0.1491
85 S A 0.1930
86 P A 0.3860
87 I A 0.1406
88 S A -0.3301
89 I A -0.7199
90 N A -1.7358
91 Y A -1.4590
92 R A -2.5248
93 T A -1.6424
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Laboratory of Theory of Biopolymers 2018