Project name: b75d69ad4f3ea15

Status: done

Started: 2025-02-05 07:53:02
Settings
Chain sequence(s) A: MKFLMIGMGGTIASVKGSEGYESVLSAEDILKISRIKVEHEIEFLDLMNIDSTLIQPSDWVKLAKEIYKRSSEFDGILVTHGTDTLAYTASMLSFMVRGISIPVVITGSMIPLTERNSDAPLNLLTSIKFLEKGIGGIFVSFNGKIMLGVRTSKVRTMSKDAFESINYPVIAKLENNEIKVLHKPNLTISDLTLDTRHEPKVLVLKLIPGLSGDIISKAIEVGYKGIIIEGYGAGGIPYRNSDLLETISEVSTTVPVVMTTQAVYDGVDLMRYKVGRMALRAGIIPAGDMTKEATVTKLMWILGHTRKVEEVRELMRKNIAGELTRVS
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:41)
Show buried residues

Minimal score value
-2.2892
Maximal score value
1.9609
Average score
-0.2765
Total score value
-90.7071

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.5915
2 K A -0.8485
3 F A 0.0000
4 L A 0.0000
5 M A 0.0000
6 I A 0.0000
7 G A 0.0000
8 M A 0.0000
9 G A 0.0000
10 G A 0.0000
11 T A -0.0193
12 I A 0.0000
13 A A 0.0000
14 S A 0.0000
15 V A 0.2853
16 K A -1.5342
17 G A -0.5399
18 S A -0.5708
19 E A -1.8902
20 G A -0.3707
21 Y A 0.1867
22 E A -1.6523
23 S A -0.0786
24 V A 1.5726
25 L A 0.4389
26 S A -0.0226
27 A A 0.0000
28 E A -1.0761
29 D A -1.0635
30 I A 0.0000
31 L A -0.1276
32 K A -1.5697
33 I A 0.2520
34 S A 0.0000
35 R A -1.7952
36 I A -0.3766
37 K A -1.6069
38 V A -0.4033
39 E A -1.8146
40 H A -0.8691
41 E A -1.8948
42 I A -0.2140
43 E A -0.6229
44 F A 0.3973
45 L A 0.2268
46 D A -0.9992
47 L A 0.1380
48 M A 0.1190
49 N A -0.4143
50 I A 0.0648
51 D A -1.2962
52 S A 0.0000
53 T A 0.1877
54 L A 1.4261
55 I A 0.0000
56 Q A -1.2054
57 P A -0.2917
58 S A -0.2200
59 D A 0.0000
60 W A 0.0000
61 V A 0.0556
62 K A -1.0801
63 L A 0.0000
64 A A 0.0000
65 K A -1.3221
66 E A -0.5539
67 I A 0.0000
68 Y A 0.2592
69 K A -1.6449
70 R A -0.5666
71 S A 0.0000
72 S A -0.4187
73 E A -1.1945
74 F A 0.0000
75 D A -0.9676
76 G A 0.0000
77 I A 0.0000
78 L A 0.0000
79 V A 0.0000
80 T A 0.0000
81 H A 0.0000
82 G A 0.0000
83 T A 0.0000
84 D A -1.7913
85 T A -0.3335
86 L A 0.0000
87 A A 0.0000
88 Y A 0.3474
89 T A 0.0000
90 A A 0.0000
91 S A 0.0000
92 M A 0.0000
93 L A 0.0000
94 S A 0.0000
95 F A 0.0000
96 M A 0.0000
97 V A 0.0000
98 R A -0.5124
99 G A -0.1761
100 I A 0.0000
101 S A -0.1892
102 I A 0.1638
103 P A 0.0000
104 V A 0.0000
105 V A 0.0000
106 I A 0.0000
107 T A 0.0000
108 G A 0.0000
109 S A 0.0000
110 M A 0.2277
111 I A 0.5333
112 P A 0.0000
113 L A 0.0000
114 T A -0.2737
115 E A -1.5513
116 R A -2.2892
117 N A -1.6086
118 S A -0.1992
119 D A 0.0000
120 A A 0.0000
121 P A 0.0294
122 L A 0.5917
123 N A 0.0000
124 L A 0.0000
125 L A 0.2906
126 T A 0.0000
127 S A 0.0000
128 I A 0.0000
129 K A -0.3381
130 F A 0.0000
131 L A 0.0000
132 E A -1.2246
133 K A -1.4596
134 G A -0.6231
135 I A 0.1074
136 G A -0.0620
137 G A 0.0000
138 I A 0.0000
139 F A 0.0000
140 V A 0.0000
141 S A 0.0000
142 F A 0.0000
143 N A -0.4292
144 G A -0.1402
145 K A -0.3044
146 I A 0.0000
147 M A 0.0000
148 L A 0.0000
149 G A 0.0000
150 V A 0.0000
151 R A 0.0000
152 T A 0.0000
153 S A -0.0855
154 K A -0.2657
155 V A 0.3205
156 R A -0.6434
157 T A -0.0138
158 M A 1.0245
159 S A -0.0424
160 K A -0.8885
161 D A -0.6183
162 A A 0.0000
163 F A 0.0000
164 E A -0.2573
165 S A -0.0789
166 I A 0.0000
167 N A -0.3960
168 Y A 0.0695
169 P A -0.1107
170 V A 0.2245
171 I A 0.0000
172 A A 0.0000
173 K A -0.5934
174 L A -0.0382
175 E A -1.2004
176 N A -1.6840
177 N A -1.8246
178 E A -2.0457
179 I A 0.0000
180 K A -0.7881
181 V A 0.6319
182 L A 1.2079
183 H A -0.3650
184 K A -1.7532
185 P A -0.5676
186 N A -1.1983
187 L A 0.1945
188 T A 0.3763
189 I A 1.9609
190 S A -0.1938
191 D A -1.7141
192 L A 0.2673
193 T A 0.1586
194 L A 0.3895
195 D A -0.1005
196 T A -0.3754
197 R A -1.8901
198 H A -0.5854
199 E A -0.3268
200 P A -0.3628
201 K A -0.8703
202 V A 0.0598
203 L A 0.4257
204 V A 0.9445
205 L A 0.0272
206 K A -1.6949
207 L A 0.0000
208 I A 1.1310
209 P A -0.1279
210 G A -0.4753
211 L A 0.1120
212 S A -0.0264
213 G A 0.0000
214 D A -1.6733
215 I A 0.3300
216 I A 0.0000
217 S A -0.3957
218 K A -1.7573
219 A A 0.0000
220 I A 0.1062
221 E A -1.6689
222 V A 0.9546
223 G A 0.2427
224 Y A 0.1713
225 K A -0.6093
226 G A 0.0000
227 I A 0.0000
228 I A 0.0000
229 I A 0.0000
230 E A -0.4462
231 G A 0.0000
232 Y A 0.7600
233 G A -0.2887
234 A A -0.0996
235 G A 0.0000
236 G A 0.0076
237 I A 0.0000
238 P A -0.0266
239 Y A -0.0904
240 R A -2.0281
241 N A -1.6150
242 S A -0.4861
243 D A -1.1702
244 L A 0.0000
245 L A 0.0000
246 E A -1.8218
247 T A -0.3394
248 I A 0.0000
249 S A -0.4122
250 E A -1.8350
251 V A 0.0000
252 S A 0.0000
253 T A -0.0836
254 T A -0.0836
255 V A 0.0000
256 P A 0.0000
257 V A 0.0000
258 V A 0.0000
259 M A 0.0000
260 T A 0.0000
261 T A 0.0000
262 Q A -0.2581
263 A A 0.1783
264 V A 1.3018
265 Y A 0.9803
266 D A -1.6021
267 G A -0.3728
268 V A 0.0715
269 D A -0.5066
270 L A 0.0000
271 M A 0.7234
272 R A -1.4572
273 Y A 0.4646
274 K A -1.4197
275 V A 0.1535
276 G A 0.0000
277 R A -1.2514
278 M A 0.0005
279 A A 0.0000
280 L A -0.1360
281 R A -1.7854
282 A A 0.0000
283 G A -0.0707
284 I A 0.0000
285 I A 0.0000
286 P A -0.0292
287 A A 0.0000
288 G A -0.0947
289 D A -0.2255
290 M A 0.0000
291 T A 0.0000
292 K A -0.4941
293 E A -0.2236
294 A A 0.0000
295 T A 0.0000
296 V A 0.0000
297 T A 0.0000
298 K A 0.0000
299 L A 0.0000
300 M A 0.0000
301 W A 0.0000
302 I A 0.0000
303 L A 0.0000
304 G A -0.4195
305 H A -0.3592
306 T A -0.4046
307 R A -2.1540
308 K A -2.0346
309 V A 0.0000
310 E A -2.0977
311 E A -1.6799
312 V A 0.0000
313 R A -0.8542
314 E A -1.8282
315 L A -0.1913
316 M A 0.0000
317 R A -2.1275
318 K A -1.9810
319 N A -0.8689
320 I A 0.0000
321 A A -0.0013
322 G A -0.0438
323 E A 0.0000
324 L A 0.0000
325 T A -0.3975
326 R A -1.5303
327 V A 1.3960
328 S A 0.1083
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Laboratory of Theory of Biopolymers 2018