| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIIKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPQHCGEDDRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPVGAPLPDAPPPSPLYVPPPPSSPYAVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9412 | |
| 2 | L | A | 1.9627 | |
| 3 | P | A | 0.6541 | |
| 4 | P | A | 0.3665 | |
| 5 | T | A | 0.1194 | |
| 6 | T | A | 0.1225 | |
| 7 | P | A | 0.1601 | |
| 8 | V | A | 1.2393 | |
| 9 | A | A | 0.0810 | |
| 10 | K | A | -1.0305 | |
| 11 | V | A | -0.1708 | |
| 12 | Q | A | -1.4208 | |
| 13 | S | A | -1.5573 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4095 | |
| 16 | E | A | -2.4349 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4626 | |
| 20 | P | A | 0.1080 | |
| 21 | T | A | 0.1130 | |
| 22 | S | A | -0.1705 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1033 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1996 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8335 | |
| 31 | R | A | -2.6809 | |
| 32 | L | A | -0.7956 | |
| 33 | L | A | 1.1588 | |
| 34 | T | A | 1.3653 | |
| 35 | V | A | 1.8313 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1952 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6187 | |
| 40 | R | A | -1.6064 | |
| 41 | D | A | -0.6385 | |
| 42 | I | A | 0.9162 | |
| 43 | I | A | 1.2253 | |
| 44 | K | A | -1.0731 | |
| 45 | N | A | -1.8807 | |
| 46 | G | A | -1.2017 | |
| 47 | K | A | -0.9100 | |
| 48 | V | A | 1.4977 | |
| 49 | V | A | 2.0743 | |
| 50 | V | A | 1.2935 | |
| 51 | P | A | 0.5198 | |
| 52 | K | A | -0.5905 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1707 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4270 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2731 | |
| 70 | K | A | -1.7926 | |
| 71 | F | A | -0.6382 | |
| 72 | A | A | -0.5647 | |
| 73 | L | A | -0.8645 | |
| 74 | P | A | -1.2759 | |
| 75 | Q | A | -2.4965 | |
| 76 | K | A | -3.1025 | |
| 77 | D | A | -2.9871 | |
| 78 | F | A | -1.6615 | |
| 79 | Y | A | -1.8826 | |
| 80 | D | A | -2.6846 | |
| 81 | P | A | -2.3022 | |
| 82 | E | A | -3.0428 | |
| 83 | K | A | -3.3951 | |
| 84 | E | A | -2.4516 | |
| 85 | R | A | -1.2837 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6339 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9705 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3575 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6997 | |
| 99 | G | A | -0.5415 | |
| 100 | P | A | -0.4078 | |
| 101 | L | A | 0.0379 | |
| 102 | G | A | -0.1964 | |
| 103 | K | A | -0.5673 | |
| 104 | G | A | -0.4168 | |
| 105 | T | A | -0.4238 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.0984 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1658 | |
| 110 | L | A | -0.0906 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2413 | |
| 113 | K | A | -0.5340 | |
| 114 | L | A | -0.8267 | |
| 115 | G | A | -1.0491 | |
| 116 | D | A | -1.3550 | |
| 117 | T | A | -1.0538 | |
| 118 | E | A | -1.7807 | |
| 119 | N | A | -2.2020 | |
| 120 | P | A | -1.9836 | |
| 121 | T | A | -1.6495 | |
| 122 | E | A | -2.3959 | |
| 123 | P | A | -1.1908 | |
| 124 | Q | A | -1.0472 | |
| 125 | H | A | -0.6715 | |
| 126 | C | A | -1.2411 | |
| 127 | G | A | -2.1821 | |
| 128 | E | A | -3.0642 | |
| 129 | D | A | -3.0809 | |
| 130 | D | A | -2.1548 | |
| 131 | R | A | -1.6193 | |
| 132 | V | A | -0.4504 | |
| 133 | N | A | -0.8867 | |
| 134 | F | A | -0.3830 | |
| 135 | S | A | -0.3621 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5574 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5604 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1972 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1691 | |
| 157 | D | A | 0.3346 | |
| 158 | L | A | 0.8079 | |
| 159 | A | A | 0.1838 | |
| 160 | E | A | -1.4470 | |
| 161 | P | A | -0.2043 | |
| 162 | C | A | 0.1859 | |
| 163 | P | A | -0.1778 | |
| 164 | G | A | -0.0887 | |
| 165 | L | A | 0.5655 | |
| 166 | P | A | -0.1284 | |
| 167 | P | A | -0.3464 | |
| 168 | G | A | -0.4574 | |
| 169 | A | A | 0.0857 | |
| 170 | C | A | 0.7956 | |
| 171 | P | A | 0.5357 | |
| 172 | P | A | 0.8010 | |
| 173 | I | A | 2.0313 | |
| 174 | Q | A | 0.8679 | |
| 175 | L | A | 1.4995 | |
| 176 | V | A | 0.8588 | |
| 177 | N | A | -0.2987 | |
| 178 | S | A | -0.0866 | |
| 179 | V | A | 0.4313 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3877 | |
| 182 | D | A | 0.0823 | |
| 183 | G | A | -0.1542 | |
| 184 | D | A | -0.5358 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1250 | |
| 190 | F | A | 0.0623 | |
| 191 | G | A | -0.1023 | |
| 192 | N | A | -0.2608 | |
| 193 | M | A | -0.1199 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3916 | |
| 197 | E | A | -2.5899 | |
| 198 | L | A | -1.2036 | |
| 199 | Q | A | -2.5262 | |
| 200 | Q | A | -3.2840 | |
| 201 | D | A | -3.5129 | |
| 202 | R | A | -3.2884 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1735 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3425 | |
| 211 | S | A | -1.9074 | |
| 212 | T | A | -1.4354 | |
| 213 | R | A | -2.0883 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1524 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3315 | |
| 220 | L | A | 0.5932 | |
| 221 | K | A | -1.1302 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8213 | |
| 224 | N | A | -1.4983 | |
| 225 | E | A | -1.2374 | |
| 226 | A | A | -0.6061 | |
| 227 | Y | A | -0.3716 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6626 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0636 | |
| 234 | F | A | 0.2468 | |
| 235 | G | A | -0.8229 | |
| 236 | R | A | -2.5938 | |
| 237 | R | A | -2.8437 | |
| 238 | E | A | -2.1011 | |
| 239 | Q | A | -0.1638 | |
| 240 | V | A | 1.5059 | |
| 241 | Y | A | 1.2748 | |
| 242 | A | A | 0.4171 | |
| 243 | R | A | -0.5885 | |
| 244 | H | A | -0.7569 | |
| 245 | F | A | 0.1287 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.3697 | |
| 249 | C | A | -0.9694 | |
| 250 | G | A | -1.0751 | |
| 251 | P | A | -0.4345 | |
| 252 | V | A | -0.1541 | |
| 253 | G | A | -0.4341 | |
| 254 | A | A | -0.1035 | |
| 255 | P | A | -0.2271 | |
| 256 | L | A | 0.2827 | |
| 257 | P | A | -0.6979 | |
| 258 | D | A | -1.7250 | |
| 259 | A | A | -0.4564 | |
| 260 | P | A | -0.7237 | |
| 261 | P | A | -0.2142 | |
| 262 | P | A | 0.0599 | |
| 263 | S | A | 0.2763 | |
| 264 | P | A | 0.6972 | |
| 265 | L | A | 1.7191 | |
| 266 | Y | A | 1.5617 | |
| 267 | V | A | 1.9388 | |
| 268 | P | A | 0.9168 | |
| 269 | P | A | 0.6345 | |
| 270 | P | A | -0.1972 | |
| 271 | P | A | -0.1626 | |
| 272 | S | A | -0.1806 | |
| 273 | S | A | 0.1339 | |
| 274 | P | A | 0.1334 | |
| 275 | Y | A | 1.2823 | |
| 276 | A | A | 1.1653 | |
| 277 | V | A | 2.1636 | |
| 278 | L | A | 1.6934 | |
| 279 | P | A | 0.5579 | |
| 280 | P | A | 0.1509 | |
| 281 | Y | A | 0.2723 | |
| 282 | D | A | -0.4168 | |
| 283 | Y | A | 0.9828 | |
| 284 | F | A | 0.7442 | |
| 285 | G | A | 0.3278 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9947 | |
| 291 | L | A | 1.6320 | |
| 292 | V | A | 0.6483 | |
| 293 | S | A | -0.1609 | |
| 294 | S | A | -0.9634 | |
| 295 | D | A | -1.8425 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1038 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6271 | |
| 301 | R | A | -1.8351 | |
| 302 | P | A | -0.9506 | |
| 303 | F | A | -0.1826 | |
| 304 | W | A | -0.5524 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0780 | |
| 307 | R | A | -2.8375 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2887 | |
| 310 | G | A | -1.2360 | |
| 311 | N | A | -1.2812 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8736 | |
| 319 | N | A | -0.8756 | |
| 320 | E | A | -1.0540 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3366 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0625 | |
| 333 | N | A | 0.5703 | |
| 334 | F | A | 1.7666 | |
| 335 | T | A | 0.8690 | |
| 336 | I | A | 0.4321 | |
| 337 | S | A | -0.8433 | |
| 338 | Q | A | -1.4909 | |
| 339 | Q | A | -1.1334 | |
| 340 | L | A | 0.5632 | |
| 341 | C | A | -0.0542 | |
| 342 | T | A | -0.4605 | |
| 343 | P | A | -1.1933 | |
| 344 | E | A | -1.7481 | |
| 345 | P | A | -0.7333 | |
| 346 | N | A | -0.7529 | |
| 347 | V | A | 1.2984 | |
| 348 | Y | A | 1.2359 | |
| 349 | D | A | 0.0430 | |
| 350 | P | A | -0.3367 | |
| 351 | S | A | -0.2675 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5635 | |
| 354 | K | A | -1.6618 | |
| 355 | N | A | -1.7140 | |
| 356 | Y | A | -0.1093 | |
| 357 | L | A | 0.6480 | |
| 358 | R | A | 1.0042 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3975 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0798 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0582 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.7044 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2966 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3168 | |
| 376 | L | A | -1.7130 | |
| 377 | D | A | -2.0066 | |
| 378 | P | A | -1.0466 | |
| 379 | G | A | -1.0188 | |
| 380 | V | A | -0.9405 | |
| 381 | L | A | -0.5407 | |
| 382 | A | A | -0.6593 | |
| 383 | H | A | -0.8119 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4126 | |
| 386 | T | A | -0.5516 | |
| 387 | M | A | -0.3003 | |
| 388 | N | A | -0.8692 | |
| 389 | P | A | -1.2622 | |
| 390 | T | A | -1.4809 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4598 | |
| 393 | E | A | -2.8073 | |
| 394 | N | A | -2.4509 | |
| 395 | W | A | -1.3889 | |
| 396 | N | A | -1.0687 | |
| 397 | L | A | -0.1533 | |
| 398 | G | A | 0.5509 | |
| 399 | F | A | 2.4338 | |
| 400 | V | A | 1.8606 | |
| 401 | P | A | 0.0639 | |
| 402 | P | A | -1.8746 | |
| 403 | K | A | -3.3536 | |
| 404 | E | A | -3.8279 | |
| 405 | R | A | -4.0324 | |
| 406 | E | A | -3.8438 | |
| 407 | D | A | -2.9011 | |
| 408 | P | A | -1.7806 | |
| 409 | Y | A | -0.9826 | |
| 410 | K | A | -2.1204 | |
| 411 | G | A | -0.6356 | |
| 412 | L | A | 0.6786 | |
| 413 | I | A | 1.5869 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4048 | |
| 416 | E | A | -1.7164 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8774 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8943 | |
| 421 | E | A | -2.5122 | |
| 422 | R | A | -2.0246 | |
| 423 | F | A | -1.0179 | |
| 424 | S | A | -1.3349 | |
| 425 | Q | A | -1.7960 | |
| 426 | D | A | -2.9733 | |
| 427 | L | A | -2.1587 | |
| 428 | D | A | -3.0177 | |
| 429 | Q | A | -2.7474 | |
| 430 | F | A | -1.6004 | |
| 431 | A | A | -1.1201 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2463 | |
| 435 | K | A | -1.0714 | |
| 436 | F | A | -0.0884 | |
| 437 | L | A | 0.7990 | |
| 438 | Y | A | 0.6393 | |
| 439 | Q | A | -0.3830 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine