| Chain sequence(s) |
A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:01)
[INFO] Main: Simulation completed successfully. (00:02:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2097 | |
| 2 | D | A | 0.0886 | |
| 3 | V | A | 1.8559 | |
| 4 | F | A | 2.3313 | |
| 5 | M | A | 1.2459 | |
| 6 | K | A | -0.8464 | |
| 7 | G | A | -0.4223 | |
| 8 | L | A | -0.0797 | |
| 9 | S | A | -1.3853 | |
| 10 | K | A | -2.6258 | |
| 11 | A | A | -1.6261 | |
| 12 | K | A | -2.4253 | |
| 13 | E | A | -2.5359 | |
| 14 | G | A | -1.2948 | |
| 15 | V | A | 0.0666 | |
| 16 | V | A | -0.5865 | |
| 17 | A | A | -1.1971 | |
| 18 | A | A | -1.0461 | |
| 19 | A | A | -1.5540 | |
| 20 | E | A | -2.9951 | |
| 21 | K | A | -3.0737 | |
| 22 | T | A | -2.4026 | |
| 23 | K | A | -3.2342 | |
| 24 | Q | A | -3.1447 | |
| 25 | G | A | -1.9871 | |
| 26 | V | A | -0.5429 | |
| 27 | A | A | -1.4344 | |
| 28 | E | A | -2.4368 | |
| 29 | A | A | -1.5129 | |
| 30 | A | A | -1.5377 | |
| 31 | G | A | -2.4585 | |
| 32 | K | A | -2.8906 | |
| 33 | T | A | -1.7852 | |
| 34 | K | A | -2.0873 | |
| 35 | E | A | -1.7501 | |
| 36 | G | A | -0.0134 | |
| 37 | V | A | 1.6718 | |
| 38 | L | A | 1.7834 | |
| 39 | Y | A | 1.6972 | |
| 40 | V | A | 1.4586 | |
| 41 | G | A | 0.4161 | |
| 42 | S | A | -0.4555 | |
| 43 | K | A | -1.4405 | |
| 44 | T | A | -1.1252 | |
| 45 | K | A | -2.1418 | |
| 46 | E | A | -2.3868 | |
| 47 | G | A | -1.0866 | |
| 48 | V | A | 1.0364 | |
| 49 | V | A | 1.3772 | |
| 50 | H | A | 0.1515 | |
| 51 | G | A | 0.9338 | |
| 52 | V | A | 2.3374 | |
| 53 | A | A | 0.9256 | |
| 54 | T | A | 0.1157 | |
| 55 | V | A | 0.6992 | |
| 56 | A | A | -1.0502 | |
| 57 | E | A | -2.9393 | |
| 58 | K | A | -3.0451 | |
| 59 | T | A | -2.4466 | |
| 60 | K | A | -3.4833 | |
| 61 | E | A | -3.7116 | |
| 62 | Q | A | -2.5678 | |
| 63 | V | A | -0.3407 | |
| 64 | T | A | -0.9536 | |
| 65 | N | A | -1.0094 | |
| 66 | V | A | 1.1811 |