| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWTAPDAAFDSFAIAYPEWPPQGEAIVLTVPGSCRSYDLTGLKPGTEYFVVIYGVKGGSYSAPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.3445 | |
| 2 | P | A | 0.3099 | |
| 3 | A | A | 0.0865 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.9871 | |
| 6 | N | A | -1.4817 | |
| 7 | L | A | -0.1230 | |
| 8 | V | A | 1.3021 | |
| 9 | V | A | 0.7275 | |
| 10 | S | A | -0.5837 | |
| 11 | R | A | -2.0182 | |
| 12 | V | A | -0.9845 | |
| 13 | T | A | -1.7133 | |
| 14 | E | A | -2.9391 | |
| 15 | D | A | -2.5762 | |
| 16 | S | A | -2.0447 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.2328 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.2143 | |
| 21 | W | A | 0.0000 | |
| 22 | T | A | -1.1373 | |
| 23 | A | A | -1.2767 | |
| 24 | P | A | -1.3923 | |
| 25 | D | A | -2.1421 | |
| 26 | A | A | -1.4113 | |
| 27 | A | A | -1.0038 | |
| 28 | F | A | 0.0000 | |
| 29 | D | A | -2.4737 | |
| 30 | S | A | -1.0575 | |
| 31 | F | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | I | A | 0.0000 | |
| 34 | A | A | 1.4496 | |
| 35 | Y | A | 1.1321 | |
| 36 | P | A | 0.1720 | |
| 37 | E | A | -0.7585 | |
| 38 | W | A | 0.2097 | |
| 39 | P | A | -0.4539 | |
| 40 | P | A | -1.2654 | |
| 41 | Q | A | -1.8919 | |
| 42 | G | A | -1.8097 | |
| 43 | E | A | -1.7449 | |
| 44 | A | A | -0.0063 | |
| 45 | I | A | 1.7966 | |
| 46 | V | A | 2.3847 | |
| 47 | L | A | 1.4028 | |
| 48 | T | A | 0.4102 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -0.7752 | |
| 51 | G | A | 0.0000 | |
| 52 | S | A | -1.0619 | |
| 53 | C | A | -0.3929 | |
| 54 | R | A | -0.6333 | |
| 55 | S | A | -0.3408 | |
| 56 | Y | A | -0.6388 | |
| 57 | D | A | -1.9437 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.4599 | |
| 60 | G | A | -1.4443 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.8715 | |
| 63 | P | A | -2.4152 | |
| 64 | G | A | -1.7135 | |
| 65 | T | A | -1.5103 | |
| 66 | E | A | -0.5132 | |
| 67 | Y | A | 0.0000 | |
| 68 | F | A | 1.0941 | |
| 69 | V | A | 0.0000 | |
| 70 | V | A | 0.8806 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.7403 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -0.2421 | |
| 75 | K | A | -1.2056 | |
| 76 | G | A | -1.2655 | |
| 77 | G | A | -0.9024 | |
| 78 | S | A | 0.0176 | |
| 79 | Y | A | 1.2768 | |
| 80 | S | A | 0.0000 | |
| 81 | A | A | 0.6018 | |
| 82 | P | A | 0.0065 | |
| 83 | L | A | -0.3324 | |
| 84 | S | A | 0.4165 | |
| 85 | A | A | 1.3801 | |
| 86 | I | A | 2.2890 | |
| 87 | F | A | 0.0000 | |
| 88 | T | A | -0.3999 | |
| 89 | T | A | -1.7407 |