Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | C |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | LF20C,SQ21C,FN27C,FK107C,LC115C,EH89C,TC28C,SF85C,RY98C,FV103C,TQ117C,EA1C,LR4C,DM73C,PY14C |
Energy difference between WT (input) and mutated protein (by FoldX) | 23.7887 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:25) [INFO] FoldX: Starting FoldX energy minimalization (00:03:35) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:08) [INFO] Main: Simulation completed successfully. (00:04:09) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | C | -0.2425 | mutated: EA1C |
2 | V | C | -0.5810 | |
3 | Q | C | -0.6791 | |
4 | R | C | 0.0000 | mutated: LR4C |
5 | V | C | 1.0698 | |
6 | E | C | 0.2952 | |
7 | S | C | -0.3713 | |
8 | G | C | -0.7957 | |
9 | G | C | -0.2999 | |
10 | G | C | 0.4188 | |
11 | L | C | 1.1278 | |
12 | V | C | 0.1280 | |
13 | Q | C | -0.4542 | |
14 | Y | C | 0.5505 | mutated: PY14C |
15 | G | C | 0.3855 | |
16 | G | C | 0.2629 | |
17 | S | C | -0.2091 | |
18 | L | C | -0.3446 | |
19 | R | C | -1.5797 | |
20 | F | C | 0.0000 | mutated: LF20C |
21 | Q | C | -0.7455 | mutated: SQ21C |
22 | C | C | 0.0000 | |
23 | A | C | -0.1063 | |
24 | A | C | 0.0000 | |
25 | S | C | -0.6241 | |
26 | D | C | 0.0000 | |
27 | N | C | -1.5528 | mutated: FN27C |
28 | C | C | -1.0347 | mutated: TC28C |
29 | F | C | 0.0000 | |
30 | R | C | -2.2600 | |
31 | S | C | -1.1713 | |
32 | Y | C | -1.1182 | |
33 | E | C | -1.2587 | |
34 | M | C | 0.0000 | |
35 | S | C | 0.0000 | |
36 | W | C | 0.0000 | |
37 | V | C | 0.0000 | |
38 | R | C | 0.0000 | |
39 | Q | C | -0.4545 | |
40 | A | C | -1.0547 | |
41 | P | C | -1.2110 | |
42 | G | C | -1.4376 | |
43 | K | C | -2.1487 | |
44 | G | C | -1.0974 | |
45 | L | C | 0.2853 | |
46 | E | C | -0.4561 | |
47 | W | C | 0.2958 | |
48 | V | C | 0.0000 | |
49 | S | C | 0.0000 | |
50 | A | C | 0.0000 | |
51 | I | C | 0.0000 | |
52 | S | C | -0.5828 | |
53 | G | C | -1.0636 | |
54 | S | C | -1.0319 | |
55 | G | C | -0.8921 | |
56 | G | C | -0.7327 | |
57 | S | C | -0.3426 | |
58 | T | C | 0.1170 | |
59 | Y | C | 0.4609 | |
60 | Y | C | -0.4262 | |
61 | A | C | -1.1619 | |
62 | D | C | -2.3365 | |
63 | S | C | -1.5692 | |
64 | V | C | 0.0000 | |
65 | K | C | -2.3922 | |
66 | G | C | -1.3302 | |
67 | R | C | 0.0000 | |
68 | F | C | 0.0000 | |
69 | T | C | -0.6036 | |
70 | I | C | 0.0000 | |
71 | S | C | -0.3915 | |
72 | R | C | -0.8390 | |
73 | M | C | -0.7441 | mutated: DM73C |
74 | N | C | -1.5126 | |
75 | S | C | -1.3742 | |
76 | K | C | -1.9122 | |
77 | N | C | -1.7359 | |
78 | T | C | 0.0000 | |
79 | L | C | 0.0000 | |
80 | Y | C | 0.0000 | |
81 | L | C | 0.0000 | |
82 | Q | C | -1.0019 | |
83 | M | C | 0.0000 | |
84 | N | C | 0.1975 | |
85 | F | C | 1.3975 | mutated: SF85C |
86 | L | C | 0.0000 | |
87 | R | C | -0.9264 | |
88 | A | C | -1.1391 | |
89 | H | C | -1.5092 | mutated: EH89C |
90 | D | C | 0.0000 | |
91 | T | C | -0.6128 | |
92 | A | C | 0.0000 | |
93 | I | C | 0.4415 | |
94 | Y | C | 0.0000 | |
95 | Y | C | 0.5679 | |
96 | C | C | 0.0000 | |
97 | A | C | 0.0000 | |
98 | Y | C | 0.0000 | mutated: RY98C |
99 | L | C | 0.0000 | |
100 | R | C | -3.9864 | |
101 | D | C | -3.6540 | |
102 | G | C | -2.1700 | |
103 | V | C | -1.2985 | mutated: FV103C |
104 | N | C | -2.5154 | |
105 | K | C | -3.5358 | |
106 | G | C | -2.6645 | |
107 | K | C | -2.7316 | mutated: FK107C |
108 | D | C | -2.7386 | |
109 | Y | C | -0.7656 | |
110 | W | C | 0.1738 | |
111 | G | C | 0.1386 | |
112 | Q | C | -0.7482 | |
113 | G | C | -0.0041 | |
114 | T | C | 0.1917 | |
115 | C | C | 0.6840 | mutated: LC115C |
116 | V | C | 0.0000 | |
117 | Q | C | -0.4706 | mutated: TQ117C |
118 | V | C | 0.0000 | |
119 | S | C | -0.4410 | |
120 | S | C | -0.5943 |