| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LF20C,SQ21C,FN27C,FK107C,LC115C,EH89C,TC28C,SF85C,RY98C,FV103C,TQ117C,EA1C,LR4C,DM73C,PY14C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 23.7887 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:25)
[INFO] FoldX: Starting FoldX energy minimalization (00:03:35)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:08)
[INFO] Main: Simulation completed successfully. (00:04:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | C | -0.2425 | mutated: EA1C |
| 2 | V | C | -0.5810 | |
| 3 | Q | C | -0.6791 | |
| 4 | R | C | 0.0000 | mutated: LR4C |
| 5 | V | C | 1.0698 | |
| 6 | E | C | 0.2952 | |
| 7 | S | C | -0.3713 | |
| 8 | G | C | -0.7957 | |
| 9 | G | C | -0.2999 | |
| 10 | G | C | 0.4188 | |
| 11 | L | C | 1.1278 | |
| 12 | V | C | 0.1280 | |
| 13 | Q | C | -0.4542 | |
| 14 | Y | C | 0.5505 | mutated: PY14C |
| 15 | G | C | 0.3855 | |
| 16 | G | C | 0.2629 | |
| 17 | S | C | -0.2091 | |
| 18 | L | C | -0.3446 | |
| 19 | R | C | -1.5797 | |
| 20 | F | C | 0.0000 | mutated: LF20C |
| 21 | Q | C | -0.7455 | mutated: SQ21C |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.1063 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -0.6241 | |
| 26 | D | C | 0.0000 | |
| 27 | N | C | -1.5528 | mutated: FN27C |
| 28 | C | C | -1.0347 | mutated: TC28C |
| 29 | F | C | 0.0000 | |
| 30 | R | C | -2.2600 | |
| 31 | S | C | -1.1713 | |
| 32 | Y | C | -1.1182 | |
| 33 | E | C | -1.2587 | |
| 34 | M | C | 0.0000 | |
| 35 | S | C | 0.0000 | |
| 36 | W | C | 0.0000 | |
| 37 | V | C | 0.0000 | |
| 38 | R | C | 0.0000 | |
| 39 | Q | C | -0.4545 | |
| 40 | A | C | -1.0547 | |
| 41 | P | C | -1.2110 | |
| 42 | G | C | -1.4376 | |
| 43 | K | C | -2.1487 | |
| 44 | G | C | -1.0974 | |
| 45 | L | C | 0.2853 | |
| 46 | E | C | -0.4561 | |
| 47 | W | C | 0.2958 | |
| 48 | V | C | 0.0000 | |
| 49 | S | C | 0.0000 | |
| 50 | A | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | S | C | -0.5828 | |
| 53 | G | C | -1.0636 | |
| 54 | S | C | -1.0319 | |
| 55 | G | C | -0.8921 | |
| 56 | G | C | -0.7327 | |
| 57 | S | C | -0.3426 | |
| 58 | T | C | 0.1170 | |
| 59 | Y | C | 0.4609 | |
| 60 | Y | C | -0.4262 | |
| 61 | A | C | -1.1619 | |
| 62 | D | C | -2.3365 | |
| 63 | S | C | -1.5692 | |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -2.3922 | |
| 66 | G | C | -1.3302 | |
| 67 | R | C | 0.0000 | |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.6036 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.3915 | |
| 72 | R | C | -0.8390 | |
| 73 | M | C | -0.7441 | mutated: DM73C |
| 74 | N | C | -1.5126 | |
| 75 | S | C | -1.3742 | |
| 76 | K | C | -1.9122 | |
| 77 | N | C | -1.7359 | |
| 78 | T | C | 0.0000 | |
| 79 | L | C | 0.0000 | |
| 80 | Y | C | 0.0000 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.0019 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | 0.1975 | |
| 85 | F | C | 1.3975 | mutated: SF85C |
| 86 | L | C | 0.0000 | |
| 87 | R | C | -0.9264 | |
| 88 | A | C | -1.1391 | |
| 89 | H | C | -1.5092 | mutated: EH89C |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -0.6128 | |
| 92 | A | C | 0.0000 | |
| 93 | I | C | 0.4415 | |
| 94 | Y | C | 0.0000 | |
| 95 | Y | C | 0.5679 | |
| 96 | C | C | 0.0000 | |
| 97 | A | C | 0.0000 | |
| 98 | Y | C | 0.0000 | mutated: RY98C |
| 99 | L | C | 0.0000 | |
| 100 | R | C | -3.9864 | |
| 101 | D | C | -3.6540 | |
| 102 | G | C | -2.1700 | |
| 103 | V | C | -1.2985 | mutated: FV103C |
| 104 | N | C | -2.5154 | |
| 105 | K | C | -3.5358 | |
| 106 | G | C | -2.6645 | |
| 107 | K | C | -2.7316 | mutated: FK107C |
| 108 | D | C | -2.7386 | |
| 109 | Y | C | -0.7656 | |
| 110 | W | C | 0.1738 | |
| 111 | G | C | 0.1386 | |
| 112 | Q | C | -0.7482 | |
| 113 | G | C | -0.0041 | |
| 114 | T | C | 0.1917 | |
| 115 | C | C | 0.6840 | mutated: LC115C |
| 116 | V | C | 0.0000 | |
| 117 | Q | C | -0.4706 | mutated: TQ117C |
| 118 | V | C | 0.0000 | |
| 119 | S | C | -0.4410 | |
| 120 | S | C | -0.5943 |