| Chain sequence(s) |
A: EVQLQASGGGLVQTGGSLRLACAGSGRSFNNYGMGWFRQAPGKERQFVAAISGNDHTTHYSDSVKGRFTISRDNAKTTVYLQMNSLKPEDTAVYYCAADRLGSFFFPRASPSDYGYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:15)
[INFO] Main: Simulation completed successfully. (00:01:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.4000 | |
| 2 | V | A | -1.7187 | |
| 3 | Q | A | -2.0250 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.7921 | |
| 6 | A | A | -1.1134 | |
| 7 | S | A | -1.2200 | |
| 8 | G | A | -1.1048 | |
| 9 | G | A | -0.7540 | |
| 10 | G | A | -0.0255 | |
| 11 | L | A | 1.0704 | |
| 12 | V | A | 0.0340 | |
| 13 | Q | A | -1.2033 | |
| 14 | T | A | -1.3811 | |
| 15 | G | A | -1.3003 | |
| 16 | G | A | -0.8679 | |
| 17 | S | A | -1.2591 | |
| 18 | L | A | -1.0921 | |
| 19 | R | A | -2.2319 | |
| 20 | L | A | 0.0000 | |
| 21 | A | A | -0.8350 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.0400 | |
| 24 | G | A | 0.0000 | |
| 25 | S | A | -1.7567 | |
| 26 | G | A | -2.0318 | |
| 27 | R | A | -2.4546 | |
| 28 | S | A | -1.7228 | |
| 29 | F | A | 0.0000 | |
| 30 | N | A | -2.0049 | |
| 31 | N | A | -2.0110 | |
| 32 | Y | A | -1.0440 | |
| 33 | G | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | -1.1505 | |
| 39 | Q | A | -1.8461 | |
| 40 | A | A | -1.8570 | |
| 41 | P | A | -1.3399 | |
| 42 | G | A | -1.9141 | |
| 43 | K | A | -3.2484 | |
| 44 | E | A | -3.3489 | |
| 45 | R | A | -2.3646 | |
| 46 | Q | A | -1.7251 | |
| 47 | F | A | -0.7711 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | G | A | 0.0000 | |
| 54 | N | A | -2.7723 | |
| 55 | D | A | -2.9364 | |
| 56 | H | A | -2.0853 | |
| 57 | T | A | -1.2428 | |
| 58 | T | A | -0.5263 | |
| 59 | H | A | -0.6371 | |
| 60 | Y | A | -0.9611 | |
| 61 | S | A | -1.4201 | |
| 62 | D | A | -2.4436 | |
| 63 | S | A | -1.7311 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.6335 | |
| 66 | G | A | -1.7534 | |
| 67 | R | A | -1.3749 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9730 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.4836 | |
| 72 | R | A | 0.0000 | |
| 73 | D | A | -1.4876 | |
| 74 | N | A | -1.7841 | |
| 75 | A | A | -1.3099 | |
| 76 | K | A | -2.0796 | |
| 77 | T | A | -1.4265 | |
| 78 | T | A | -1.1302 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.6407 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.5421 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.3591 | |
| 85 | S | A | -1.1394 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.1188 | |
| 88 | P | A | -1.8244 | |
| 89 | E | A | -2.2873 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8765 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.3597 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.5319 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | D | A | 0.0000 | |
| 100 | R | A | -1.7621 | |
| 101 | L | A | 0.4838 | |
| 102 | G | A | -0.3053 | |
| 103 | S | A | 0.4844 | |
| 104 | F | A | 2.9731 | |
| 105 | F | A | 2.9380 | |
| 106 | F | A | 1.4368 | |
| 107 | P | A | 0.4073 | |
| 108 | R | A | -0.0180 | |
| 109 | A | A | -0.3509 | |
| 110 | S | A | -0.6112 | |
| 111 | P | A | -0.6511 | |
| 112 | S | A | -0.7097 | |
| 113 | D | A | -1.0888 | |
| 114 | Y | A | 0.0000 | |
| 115 | G | A | -0.7693 | |
| 116 | Y | A | -0.5844 | |
| 117 | W | A | -0.2594 | |
| 118 | G | A | -1.0230 | |
| 119 | Q | A | -1.5131 | |
| 120 | G | A | -1.0043 | |
| 121 | T | A | -1.0581 | |
| 122 | Q | A | -0.9712 | |
| 123 | V | A | 0.0000 | |
| 124 | T | A | -0.2328 | |
| 125 | V | A | 0.0000 | |
| 126 | S | A | -0.7129 |