Project name: b79839688c165b2

Status: done

Started: 2024-12-20 12:04:30
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Chain sequence(s) B: ALTQPASVSGSLGQSITISCTGSSNDFGDYNYVSWYQQHPGKAPKLMIYDVDNRPSGVSNRFSGSKSGNTASLTISGVLAEDEADYFCSSYTSSSTLYVFGSGTKVTVL
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:40)
Show buried residues

Minimal score value
-3.0324
Maximal score value
2.1555
Average score
-0.5396
Total score value
-58.8146

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
3 A B -0.0506
4 L B 0.0000
5 T B -0.0219
6 Q B 0.0000
7 P B -0.4176
8 A B -0.5585
9 S B -0.8899
11 V B -0.3522
12 S B -0.2616
13 G B 0.0000
14 S B 0.8249
15 L B 1.4836
16 G B -0.2682
17 Q B -1.0423
18 S B -0.8663
19 I B 0.0000
20 T B -0.1706
21 I B 0.0000
22 S B -0.2297
23 C B 0.0000
24 T B -0.4937
25 G B 0.0000
26 S B -1.1719
27 S B -1.7346
28 N B -3.0324
29 D B -2.9498
30 F B 0.0000
31 G B -2.0154
35 D B -2.9705
36 Y B 0.0000
37 N B -1.4572
38 Y B 0.1531
39 V B 0.0000
40 S B 0.0000
41 W B 0.0000
42 Y B -0.0056
43 Q B 0.0000
44 Q B -1.7510
45 H B -1.9445
46 P B -1.4138
47 G B -1.5088
48 K B -2.3729
49 A B -1.4069
50 P B -1.3873
51 K B -1.6534
52 L B -0.1554
53 M B 0.0000
54 I B 0.0000
55 Y B -0.9444
56 D B -1.8339
57 V B 0.0000
65 D B -2.9070
66 N B -2.6412
67 R B -2.0076
68 P B -0.7457
69 S B -0.6788
70 G B -0.7410
71 V B -0.7284
72 S B -0.9890
74 N B -1.6503
75 R B -0.9953
76 F B 0.0000
77 S B -1.3787
78 G B -1.5526
79 S B -1.4721
80 K B -1.7326
83 S B -1.1975
84 G B -1.6385
85 N B -2.1719
86 T B -1.0085
87 A B 0.0000
88 S B -0.5877
89 L B 0.0000
90 T B -0.2913
91 I B 0.0000
92 S B -0.7968
93 G B -0.4188
94 V B 0.0000
95 L B 0.2641
96 A B -0.2930
97 E B -2.0306
98 D B 0.0000
99 E B -2.0684
100 A B 0.0000
101 D B -1.4601
102 Y B 0.0000
103 F B 0.1745
104 C B 0.0000
105 S B 0.0000
106 S B 0.0000
107 Y B 1.8470
108 T B 0.5910
109 S B -0.9038
110 S B -0.1691
113 S B 0.4084
114 T B 0.8821
115 L B 2.1555
116 Y B 1.9721
117 V B 1.9023
118 F B 1.9144
119 G B 0.0000
120 S B 0.1338
121 G B -0.3550
122 T B 0.0000
123 K B -2.1162
124 V B 0.0000
125 T B -0.5737
126 V B 0.2808
127 L B 1.8318
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Laboratory of Theory of Biopolymers 2018