| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHEGADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRAGPEGHPLPDAPPPSPLYVRPPPSSPYAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9454 | |
| 2 | L | A | 1.9640 | |
| 3 | P | A | 0.8410 | |
| 4 | P | A | 0.3833 | |
| 5 | T | A | 0.1261 | |
| 6 | T | A | 0.1282 | |
| 7 | P | A | 0.1810 | |
| 8 | V | A | 1.2095 | |
| 9 | A | A | 0.0885 | |
| 10 | K | A | -1.0298 | |
| 11 | V | A | -0.1702 | |
| 12 | Q | A | -1.4115 | |
| 13 | S | A | -1.5546 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4113 | |
| 16 | E | A | -2.4358 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4631 | |
| 20 | P | A | 0.1284 | |
| 21 | T | A | 0.1780 | |
| 22 | S | A | -0.0974 | |
| 23 | L | A | 0.0853 | |
| 24 | F | A | -0.0428 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2756 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8822 | |
| 31 | R | A | -2.6679 | |
| 32 | L | A | -0.7856 | |
| 33 | L | A | 1.1674 | |
| 34 | T | A | 1.3699 | |
| 35 | V | A | 1.8264 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2394 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6570 | |
| 40 | E | A | -1.7344 | |
| 41 | D | A | -0.9551 | |
| 42 | I | A | 0.8621 | |
| 43 | V | A | 0.9129 | |
| 44 | K | A | -1.4003 | |
| 45 | D | A | -2.4404 | |
| 46 | G | A | -1.4704 | |
| 47 | K | A | -1.1224 | |
| 48 | V | A | 1.3549 | |
| 49 | V | A | 1.9705 | |
| 50 | V | A | 1.2441 | |
| 51 | P | A | 0.4227 | |
| 52 | K | A | -0.6859 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1532 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3980 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2650 | |
| 70 | K | A | -1.7849 | |
| 71 | F | A | -0.6334 | |
| 72 | A | A | -0.5763 | |
| 73 | L | A | -0.8624 | |
| 74 | P | A | -1.2728 | |
| 75 | Q | A | -2.5105 | |
| 76 | K | A | -3.1083 | |
| 77 | D | A | -2.9914 | |
| 78 | F | A | -1.6605 | |
| 79 | Y | A | -1.8853 | |
| 80 | D | A | -2.6875 | |
| 81 | P | A | -2.3627 | |
| 82 | E | A | -3.0532 | |
| 83 | K | A | -3.3937 | |
| 84 | E | A | -2.4597 | |
| 85 | R | A | -1.2976 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6797 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9606 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3417 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6819 | |
| 99 | G | A | -0.5243 | |
| 100 | P | A | -0.3834 | |
| 101 | L | A | 0.0863 | |
| 102 | G | A | -0.1998 | |
| 103 | K | A | -0.6404 | |
| 104 | G | A | -0.4548 | |
| 105 | T | A | -0.4529 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1481 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4246 | |
| 110 | L | A | 0.4113 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9467 | |
| 113 | K | A | -0.3069 | |
| 114 | L | A | -1.0905 | |
| 115 | G | A | -0.9168 | |
| 116 | D | A | -1.2332 | |
| 117 | T | A | -0.8210 | |
| 118 | E | A | -1.7158 | |
| 119 | N | A | -1.9408 | |
| 120 | P | A | -1.3411 | |
| 121 | T | A | -0.6854 | |
| 122 | A | A | -0.4405 | |
| 123 | P | A | -0.1769 | |
| 124 | V | A | -0.5835 | |
| 125 | H | A | -1.5327 | |
| 126 | E | A | -2.7108 | |
| 127 | G | A | -2.0778 | |
| 128 | A | A | -1.4422 | |
| 129 | D | A | -2.1515 | |
| 130 | V | A | -1.4255 | |
| 131 | R | A | -0.7443 | |
| 132 | V | A | 0.4302 | |
| 133 | A | A | 0.4494 | |
| 134 | F | A | 0.2857 | |
| 135 | S | A | -0.0677 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4925 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2535 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5531 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2043 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1205 | |
| 157 | D | A | 0.3020 | |
| 158 | I | A | 0.8346 | |
| 159 | A | A | 0.1140 | |
| 160 | E | A | -1.4806 | |
| 161 | P | A | -0.2294 | |
| 162 | C | A | 0.1859 | |
| 163 | P | A | -0.1738 | |
| 164 | G | A | -0.0846 | |
| 165 | L | A | 0.5802 | |
| 166 | P | A | -0.1180 | |
| 167 | P | A | -0.3415 | |
| 168 | G | A | -0.4245 | |
| 169 | A | A | -0.0305 | |
| 170 | C | A | 0.7378 | |
| 171 | P | A | 0.5525 | |
| 172 | P | A | 0.8403 | |
| 173 | I | A | 2.0408 | |
| 174 | Q | A | 0.8419 | |
| 175 | L | A | 1.4375 | |
| 176 | V | A | 0.8282 | |
| 177 | N | A | -0.3163 | |
| 178 | S | A | 0.0168 | |
| 179 | V | A | 0.4260 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3835 | |
| 182 | D | A | 0.0849 | |
| 183 | G | A | -0.1533 | |
| 184 | D | A | -0.5149 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1107 | |
| 190 | F | A | 0.0637 | |
| 191 | G | A | -0.1071 | |
| 192 | N | A | -0.2504 | |
| 193 | M | A | -0.1048 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3540 | |
| 197 | E | A | -2.5793 | |
| 198 | L | A | -1.1955 | |
| 199 | Q | A | -2.5363 | |
| 200 | Q | A | -3.3054 | |
| 201 | D | A | -3.5749 | |
| 202 | R | A | -3.3309 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1764 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3430 | |
| 211 | S | A | -1.8863 | |
| 212 | T | A | -1.4036 | |
| 213 | R | A | -2.0046 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1561 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3504 | |
| 220 | L | A | 0.6009 | |
| 221 | K | A | -1.1178 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8971 | |
| 224 | N | A | -1.5040 | |
| 225 | E | A | -1.2486 | |
| 226 | A | A | -0.6117 | |
| 227 | Y | A | -0.4086 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6771 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1575 | |
| 234 | F | A | 0.0105 | |
| 235 | G | A | -0.9211 | |
| 236 | R | A | -2.6676 | |
| 237 | R | A | -2.9309 | |
| 238 | E | A | -2.1974 | |
| 239 | Q | A | -0.2281 | |
| 240 | V | A | 1.3897 | |
| 241 | Y | A | 1.0764 | |
| 242 | A | A | 0.1792 | |
| 243 | R | A | -1.0153 | |
| 244 | H | A | -0.9659 | |
| 245 | F | A | 0.0674 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.6446 | |
| 249 | A | A | -1.2744 | |
| 250 | G | A | -1.1346 | |
| 251 | P | A | -1.1487 | |
| 252 | E | A | -1.3570 | |
| 253 | G | A | -1.2746 | |
| 254 | H | A | -1.4605 | |
| 255 | P | A | -1.3409 | |
| 256 | L | A | -0.3506 | |
| 257 | P | A | -0.8816 | |
| 258 | D | A | -1.9657 | |
| 259 | A | A | -0.8872 | |
| 260 | P | A | -0.9912 | |
| 261 | P | A | -0.5727 | |
| 262 | P | A | -0.1710 | |
| 263 | S | A | -0.0097 | |
| 264 | P | A | 0.7014 | |
| 265 | L | A | 1.5120 | |
| 266 | Y | A | 1.1391 | |
| 267 | V | A | 1.0822 | |
| 268 | R | A | -1.0707 | |
| 269 | P | A | -0.2349 | |
| 270 | P | A | -0.5373 | |
| 271 | P | A | -0.3259 | |
| 272 | S | A | -0.1022 | |
| 273 | S | A | 0.1283 | |
| 274 | P | A | 0.4785 | |
| 275 | Y | A | 1.2021 | |
| 276 | A | A | 0.7790 | |
| 277 | V | A | 1.7319 | |
| 278 | R | A | 0.4139 | |
| 279 | P | A | -0.3376 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.5103 | |
| 282 | D | A | -0.9727 | |
| 283 | Y | A | 0.8006 | |
| 284 | F | A | 0.6845 | |
| 285 | G | A | 0.2472 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9035 | |
| 291 | L | A | 1.6103 | |
| 292 | V | A | 0.6275 | |
| 293 | S | A | -0.1494 | |
| 294 | S | A | -0.9524 | |
| 295 | D | A | -1.8416 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1029 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6326 | |
| 301 | R | A | -1.8480 | |
| 302 | P | A | -0.9752 | |
| 303 | F | A | -0.2238 | |
| 304 | W | A | -0.5759 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0911 | |
| 307 | R | A | -2.9302 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6639 | |
| 310 | G | A | -1.4299 | |
| 311 | N | A | -1.3594 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8361 | |
| 319 | N | A | -0.9412 | |
| 320 | E | A | -1.0368 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3271 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0835 | |
| 333 | N | A | 0.5387 | |
| 334 | F | A | 1.7512 | |
| 335 | T | A | 0.8690 | |
| 336 | I | A | 0.4553 | |
| 337 | S | A | -0.8367 | |
| 338 | Q | A | -1.5069 | |
| 339 | Q | A | -0.8742 | |
| 340 | L | A | 0.7962 | |
| 341 | C | A | 0.4183 | |
| 342 | T | A | 0.1487 | |
| 343 | P | A | -0.2781 | |
| 344 | A | A | 0.1312 | |
| 345 | P | A | 0.1678 | |
| 346 | N | A | -0.2867 | |
| 347 | V | A | 1.5508 | |
| 348 | Y | A | 1.4449 | |
| 349 | D | A | 0.0473 | |
| 350 | P | A | -0.3380 | |
| 351 | S | A | -0.2672 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5599 | |
| 354 | K | A | -1.6581 | |
| 355 | N | A | -1.7011 | |
| 356 | Y | A | -0.0895 | |
| 357 | L | A | 0.6368 | |
| 358 | R | A | 0.9632 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3872 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0658 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0057 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6848 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3060 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3074 | |
| 376 | L | A | -1.7045 | |
| 377 | D | A | -1.9773 | |
| 378 | P | A | -1.0302 | |
| 379 | G | A | -1.0090 | |
| 380 | V | A | -0.9286 | |
| 381 | L | A | -0.5217 | |
| 382 | A | A | -0.6494 | |
| 383 | H | A | -0.8060 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4114 | |
| 386 | T | A | -0.5522 | |
| 387 | M | A | -0.2980 | |
| 388 | N | A | -0.8629 | |
| 389 | P | A | -1.2487 | |
| 390 | T | A | -1.4700 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4927 | |
| 393 | E | A | -2.8488 | |
| 394 | N | A | -2.4748 | |
| 395 | W | A | -1.4679 | |
| 396 | N | A | -1.2947 | |
| 397 | L | A | -0.2664 | |
| 398 | G | A | 0.4451 | |
| 399 | F | A | 2.3884 | |
| 400 | V | A | 1.8065 | |
| 401 | P | A | 0.0229 | |
| 402 | P | A | -1.9000 | |
| 403 | K | A | -3.3283 | |
| 404 | E | A | -3.7836 | |
| 405 | R | A | -3.9350 | |
| 406 | E | A | -3.7972 | |
| 407 | D | A | -2.8717 | |
| 408 | P | A | -1.7646 | |
| 409 | Y | A | -0.9865 | |
| 410 | K | A | -2.1232 | |
| 411 | G | A | -0.6398 | |
| 412 | L | A | 0.6738 | |
| 413 | I | A | 1.5873 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3925 | |
| 416 | E | A | -1.6941 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9433 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0285 | |
| 421 | E | A | -2.7475 | |
| 422 | R | A | -2.5683 | |
| 423 | F | A | -1.2515 | |
| 424 | S | A | -1.4640 | |
| 425 | Q | A | -1.8911 | |
| 426 | D | A | -2.9162 | |
| 427 | L | A | -2.0090 | |
| 428 | D | A | -2.7988 | |
| 429 | Q | A | -2.6387 | |
| 430 | F | A | -1.4574 | |
| 431 | A | A | -0.9243 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6386 | |
| 435 | K | A | -0.7401 | |
| 436 | F | A | 0.1171 | |
| 437 | L | A | 1.0097 | |
| 438 | Y | A | 0.8128 | |
| 439 | Q | A | -0.2850 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine