| Chain sequence(s) |
H: QVQLQQSGPELVKPGASVKISCEASGYTFADYYMNWVKQSHGQSLEWIGDINPSNGNTAYNQKFKDKATLTVDKSSSTAYMELRSLTSEDSAVYFCARGGLLLDSWGQGTTLTVSS
L: DIVITQSPASLAVSLGKRATISCRASESVSIIGTNLIHWYQQKPGQPPKLLIYHASNLETGVPARFSGSGSGTDFTLTIDPVEEDDVAIYYCLQGGKFSTFGAGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4604 | |
| 2 | V | H | -0.9705 | |
| 3 | Q | H | -1.7817 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.9860 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -1.0752 | |
| 8 | G | H | -1.1005 | |
| 9 | P | H | -0.5339 | |
| 11 | E | H | -0.4197 | |
| 12 | L | H | 0.7312 | |
| 13 | V | H | -0.3449 | |
| 14 | K | H | -1.6985 | |
| 15 | P | H | -1.5227 | |
| 16 | G | H | -1.2774 | |
| 17 | A | H | -1.0440 | |
| 18 | S | H | -1.1643 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.3887 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.5767 | |
| 23 | C | H | 0.0000 | |
| 24 | E | H | -1.1666 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.0661 | |
| 27 | G | H | -0.9897 | |
| 28 | Y | H | -0.6180 | |
| 29 | T | H | -0.5362 | |
| 30 | F | H | 0.0000 | |
| 35 | A | H | -1.2171 | |
| 36 | D | H | -1.5470 | |
| 37 | Y | H | -0.2960 | |
| 38 | Y | H | 0.2280 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.8319 | |
| 45 | S | H | -1.3734 | |
| 46 | H | H | -1.5919 | |
| 47 | G | H | -1.5239 | |
| 48 | Q | H | -1.8474 | |
| 49 | S | H | -1.0046 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9671 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | D | H | -0.1855 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -1.0145 | |
| 58 | P | H | 0.0000 | |
| 59 | S | H | -1.6021 | |
| 62 | N | H | -2.0605 | |
| 63 | G | H | -1.8525 | |
| 64 | N | H | -1.8512 | |
| 65 | T | H | -0.8635 | |
| 66 | A | H | -0.5098 | |
| 67 | Y | H | -1.1606 | |
| 68 | N | H | -1.7578 | |
| 69 | Q | H | -2.8397 | |
| 70 | K | H | -3.1873 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.5228 | |
| 74 | D | H | -3.3179 | |
| 75 | K | H | -2.3054 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.9714 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3204 | |
| 80 | V | H | -0.6550 | |
| 81 | D | H | -1.4062 | |
| 82 | K | H | -2.2404 | |
| 83 | S | H | -1.2500 | |
| 84 | S | H | -1.0392 | |
| 85 | S | H | -1.0967 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.0952 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -0.9259 | |
| 91 | L | H | 0.0000 | |
| 92 | R | H | -1.4660 | |
| 93 | S | H | -1.2474 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.3846 | |
| 96 | S | H | -1.4592 | |
| 97 | E | H | -1.9772 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.6881 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.1270 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | G | H | -0.0046 | |
| 109 | L | H | 0.7253 | |
| 114 | L | H | 0.3334 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -0.5447 | |
| 117 | S | H | -0.6335 | |
| 118 | W | H | -0.9003 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.9060 | |
| 121 | G | H | -1.0438 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.2120 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | -0.1982 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6081 | |
| 128 | S | H | -0.7779 | |
| 1 | D | L | -1.4675 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.8416 | |
| 4 | I | L | 0.0000 | |
| 5 | T | L | -0.4723 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6135 | |
| 8 | P | L | -0.3309 | |
| 9 | A | L | -0.2606 | |
| 10 | S | L | -0.4807 | |
| 11 | L | L | -0.2288 | |
| 12 | A | L | -0.3716 | |
| 13 | V | L | -0.9498 | |
| 14 | S | L | -1.3764 | |
| 15 | L | L | -1.3149 | |
| 16 | G | L | -2.0029 | |
| 17 | K | L | -2.9688 | |
| 18 | R | L | -3.1404 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6227 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.8419 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.2230 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.7926 | |
| 27 | E | L | -1.2506 | |
| 28 | S | L | -0.8694 | |
| 29 | V | L | 0.0000 | |
| 30 | S | L | 0.6370 | |
| 31 | I | L | 2.1869 | |
| 34 | I | L | 2.4611 | |
| 35 | G | L | 0.8469 | |
| 36 | T | L | 0.5961 | |
| 37 | N | L | 0.1126 | |
| 38 | L | L | 0.1594 | |
| 39 | I | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.0478 | |
| 46 | P | L | -0.8476 | |
| 47 | G | L | -1.2518 | |
| 48 | Q | L | -1.7863 | |
| 49 | P | L | -1.2718 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.3496 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1262 | |
| 56 | H | L | -0.2561 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.5450 | |
| 66 | N | L | -0.4128 | |
| 67 | L | L | 0.1354 | |
| 68 | E | L | -0.4259 | |
| 69 | T | L | -0.4155 | |
| 70 | G | L | -0.5060 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.3353 | |
| 74 | A | L | -0.2469 | |
| 75 | R | L | -0.9819 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3908 | |
| 78 | G | L | -0.3637 | |
| 79 | S | L | -0.7437 | |
| 80 | G | L | -1.0546 | |
| 83 | S | L | -1.0709 | |
| 84 | G | L | -0.8529 | |
| 85 | T | L | -1.5225 | |
| 86 | D | L | -1.9816 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7488 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.8001 | |
| 91 | I | L | 0.0000 | |
| 92 | D | L | -2.3154 | |
| 93 | P | L | -2.1660 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -2.7593 | |
| 96 | E | L | -2.8099 | |
| 97 | D | L | -2.7890 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.6193 | |
| 100 | A | L | 0.0000 | |
| 101 | I | L | -0.2511 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.0669 | |
| 108 | G | L | -0.0066 | |
| 114 | K | L | -0.9525 | |
| 115 | F | L | 0.1637 | |
| 116 | S | L | 0.0352 | |
| 117 | T | L | 0.0357 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.1497 | |
| 121 | G | L | -0.4391 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.7259 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.6726 | |
| 126 | I | L | -0.3487 | |
| 127 | K | L | -1.2390 |