Project name: P2A10

Status: done

Started: 2026-06-05 02:12:05
Settings
Chain sequence(s) H: QVQLQQSGPELVKPGASVKISCEASGYTFADYYMNWVKQSHGQSLEWIGDINPSNGNTAYNQKFKDKATLTVDKSSSTAYMELRSLTSEDSAVYFCARGGLLLDSWGQGTTLTVSS
L: DIVITQSPASLAVSLGKRATISCRASESVSIIGTNLIHWYQQKPGQPPKLLIYHASNLETGVPARFSGSGSGTDFTLTIDPVEEDDVAIYYCLQGGKFSTFGAGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:22)
Show buried residues

Minimal score value
-3.5228
Maximal score value
2.4611
Average score
-0.6183
Total score value
-139.7428

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4604
2 V H -0.9705
3 Q H -1.7817
4 L H 0.0000
5 Q H -1.9860
6 Q H 0.0000
7 S H -1.0752
8 G H -1.1005
9 P H -0.5339
11 E H -0.4197
12 L H 0.7312
13 V H -0.3449
14 K H -1.6985
15 P H -1.5227
16 G H -1.2774
17 A H -1.0440
18 S H -1.1643
19 V H 0.0000
20 K H -1.3887
21 I H 0.0000
22 S H -0.5767
23 C H 0.0000
24 E H -1.1666
25 A H 0.0000
26 S H -1.0661
27 G H -0.9897
28 Y H -0.6180
29 T H -0.5362
30 F H 0.0000
35 A H -1.2171
36 D H -1.5470
37 Y H -0.2960
38 Y H 0.2280
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.8319
45 S H -1.3734
46 H H -1.5919
47 G H -1.5239
48 Q H -1.8474
49 S H -1.0046
50 L H 0.0000
51 E H -0.9671
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 D H -0.1855
56 I H 0.0000
57 N H -1.0145
58 P H 0.0000
59 S H -1.6021
62 N H -2.0605
63 G H -1.8525
64 N H -1.8512
65 T H -0.8635
66 A H -0.5098
67 Y H -1.1606
68 N H -1.7578
69 Q H -2.8397
70 K H -3.1873
71 F H 0.0000
72 K H -3.5228
74 D H -3.3179
75 K H -2.3054
76 A H 0.0000
77 T H -0.9714
78 L H 0.0000
79 T H -0.3204
80 V H -0.6550
81 D H -1.4062
82 K H -2.2404
83 S H -1.2500
84 S H -1.0392
85 S H -1.0967
86 T H 0.0000
87 A H 0.0000
88 Y H -0.0952
89 M H 0.0000
90 E H -0.9259
91 L H 0.0000
92 R H -1.4660
93 S H -1.2474
94 L H 0.0000
95 T H -1.3846
96 S H -1.4592
97 E H -1.9772
98 D H 0.0000
99 S H -0.6881
100 A H 0.0000
101 V H -0.1270
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 G H 0.0000
108 G H -0.0046
109 L H 0.7253
114 L H 0.3334
115 L H 0.0000
116 D H -0.5447
117 S H -0.6335
118 W H -0.9003
119 G H 0.0000
120 Q H -1.9060
121 G H -1.0438
122 T H 0.0000
123 T H -0.2120
124 L H 0.0000
125 T H -0.1982
126 V H 0.0000
127 S H -0.6081
128 S H -0.7779
1 D L -1.4675
2 I L 0.0000
3 V L 0.8416
4 I L 0.0000
5 T L -0.4723
6 Q L 0.0000
7 S L -0.6135
8 P L -0.3309
9 A L -0.2606
10 S L -0.4807
11 L L -0.2288
12 A L -0.3716
13 V L -0.9498
14 S L -1.3764
15 L L -1.3149
16 G L -2.0029
17 K L -2.9688
18 R L -3.1404
19 A L 0.0000
20 T L -0.6227
21 I L 0.0000
22 S L -0.8419
23 C L 0.0000
24 R L -2.2230
25 A L 0.0000
26 S L -0.7926
27 E L -1.2506
28 S L -0.8694
29 V L 0.0000
30 S L 0.6370
31 I L 2.1869
34 I L 2.4611
35 G L 0.8469
36 T L 0.5961
37 N L 0.1126
38 L L 0.1594
39 I L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.0478
46 P L -0.8476
47 G L -1.2518
48 Q L -1.7863
49 P L -1.2718
50 P L 0.0000
51 K L -1.3496
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.1262
56 H L -0.2561
57 A L 0.0000
65 S L -0.5450
66 N L -0.4128
67 L L 0.1354
68 E L -0.4259
69 T L -0.4155
70 G L -0.5060
71 V L 0.0000
72 P L -0.3353
74 A L -0.2469
75 R L -0.9819
76 F L 0.0000
77 S L -0.3908
78 G L -0.3637
79 S L -0.7437
80 G L -1.0546
83 S L -1.0709
84 G L -0.8529
85 T L -1.5225
86 D L -1.9816
87 F L 0.0000
88 T L -0.7488
89 L L 0.0000
90 T L -0.8001
91 I L 0.0000
92 D L -2.3154
93 P L -2.1660
94 V L 0.0000
95 E L -2.7593
96 E L -2.8099
97 D L -2.7890
98 D L 0.0000
99 V L -0.6193
100 A L 0.0000
101 I L -0.2511
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 G L 0.0669
108 G L -0.0066
114 K L -0.9525
115 F L 0.1637
116 S L 0.0352
117 T L 0.0357
118 F L 0.0000
119 G L 0.0000
120 A L -0.1497
121 G L -0.4391
122 T L 0.0000
123 K L -0.7259
124 L L 0.0000
125 E L -0.6726
126 I L -0.3487
127 K L -1.2390
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Laboratory of Theory of Biopolymers 2018