Project name: RSF1

Status: done

Started: 2026-07-03 10:45:04
Settings
Chain sequence(s) A: MATAAAAAAVMAPPGCPGSCPNFAVVCSFLERYGPLLDLPELPFPELERVLQAPPPDVGNGEVPKELVELHLKLMRKIGKSVTADRWEKYLIKICQEFNSTWAWEMEKKGYLEMSVECKLALLKYLCECQFDDNLKFKNIINEEDADTMRLQPIGRDKDGLMYWYQLDQDHNVRMYIEEQDDQDGSSWKCIVRNRNELAETLALLKAQIDPVLLKNSSQQDNSSRESPSLEDEETKKEEETPKQEEQKESEKMKSEEQPMDLENRSTANVLEETTVKKEKEDEKELVKLPVIVKLEKPLPENEEKKIIKEESDSFKENVKPIKVEVKECRADPKDTKSSMEKPVAQEPERIEFGGNIKSSHEITEKSTEETEKLKNDQQAKIPLKKREIKLSDDFDSPVKGPLCKSVTPTKEFLKDEIKQEEETCKRISTITALGHEGKQLVNGEVSDERVAPNFKTEPIETKFYETKEESYSPSKDRNIITEGNGTESLNSVITSMKTGELEKETAPLRKDADSSISVLEIHSQKAQIEEPDPPEMETSLDSSEMAKDLSSKTALSSTESCTMKGEEKSPKTKKDKRPPILECLEKLEKSKKTFLDKDAQRLSPIPEEVPKSTLESEKPGSPEAAETSPPSNIIDHCEKLASEKEVVECQSTSTVGGQSVKKVDLETLKEDSEFTKVEMDNLDNAQTSGIEEPSETKGSMQKSKFKYKLVPEEETTASENTEITSERQKEGIKLTIRISSRKKKPDSPPKVLEPENKQEKTEKEEEKTNVGRTLRRSPRISRPTAKVAEIRDQKADKKRGEGEDEVEEESTALQKTDKKEILKKSEKDTNSKVSKVKPKGKVRWTGSRTRGRWKYSSNDESEGSGSEKSSAASEEEEEKESEEAILADDDEPCKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCEKLEEQLQDLDVALKKKERAERRKERLVYVGISIENIIPPQEPDFSEDQEEKKKDSKKSKANLLERRSTRTRKCISYRFDEFDEAIDEAIEDDIKEADGGGVGRGKDISTITGHRGKDISTILDEERKENKRPQRAAAARRKKRRRLNDLDSDSNLDEEESEDEFKISDGSQDEFVVSDENPDESEEDPPSNDDSDTDFCSRRLRRHPSRPMRQSRRLRRKTPKKKYSDDDEEEESEENSRDSESDFSDDFSDDFVETRRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYLSKNSEDDELAKESKRSVRKRGRSTDEYSEADEEEEEEEGKPSRKRLHRIETDEEESCDNAHGDANQPARDSQPRVLPSEQESTKKPYRIESDEEEDFENVGKVGSPLDYSLVDLPSTNGQSPGKAIENLIGKPTEKSQTPKDNSTASASLASNGTSGGQEAGAPEEEEDELLRVTDLVDYVCNSEQL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:17:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:17:57)
Show buried residues

Minimal score value
-4.8836
Maximal score value
3.3952
Average score
-1.5199
Total score value
-2190.2433

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0727
2 A A 0.3787
3 T A 0.3360
4 A A 0.7604
5 A A 0.5542
6 A A 0.8878
7 A A 1.1632
8 A A 1.0957
9 A A 1.0794
10 V A 2.1404
11 M A 1.8552
12 A A 0.8857
13 P A 0.1410
14 P A -0.2292
15 G A -0.7681
16 C A -0.6615
17 P A 0.0000
18 G A 0.0000
19 S A -0.3685
20 C A -0.5479
21 P A -0.4192
22 N A -0.2514
23 F A 0.0000
24 A A 0.0000
25 V A 0.2872
26 V A 0.0000
27 C A 0.0000
28 S A -0.6502
29 F A 0.0000
30 L A -1.2507
31 E A -2.4279
32 R A -1.5431
33 Y A 0.0000
34 G A 0.0000
35 P A -1.2103
36 L A 0.0940
37 L A 0.0000
38 D A -2.0313
39 L A 0.0000
40 P A -1.7997
41 E A -2.8093
42 L A 0.0000
43 P A -1.6098
44 F A 0.0000
45 P A -1.3813
46 E A -2.1934
47 L A 0.0000
48 E A 0.0000
49 R A -2.3816
50 V A -1.6044
51 L A 0.0000
52 Q A -1.4101
53 A A -1.1598
54 P A -1.0447
55 P A -0.6532
56 P A -1.0317
57 D A -1.4933
58 V A -0.0525
59 G A -1.2034
60 N A -2.0900
61 G A -2.1208
62 E A -2.4157
63 V A -1.6643
64 P A -1.9355
65 K A -2.7282
66 E A -2.6584
67 L A 0.0000
68 V A 0.0000
69 E A -1.8422
70 L A 0.0000
71 H A 0.0000
72 L A 0.0000
73 K A -1.6284
74 L A 0.0000
75 M A 0.0000
76 R A -2.3719
77 K A -2.2987
78 I A 0.0000
79 G A -1.9063
80 K A -2.1849
81 S A -1.2930
82 V A 0.0000
83 T A -1.5873
84 A A -1.6019
85 D A -2.9410
86 R A -3.2708
87 W A 0.0000
88 E A -2.3490
89 K A -3.1160
90 Y A -1.7809
91 L A 0.0000
92 I A -2.0039
93 K A -2.7969
94 I A 0.0000
95 C A 0.0000
96 Q A -2.3729
97 E A -2.5950
98 F A -0.9257
99 N A -0.8218
100 S A -0.8489
101 T A -0.1311
102 W A -0.2515
103 A A 0.0000
104 W A -0.4885
105 E A -1.5371
106 M A 0.0000
107 E A -2.9299
108 K A -3.2011
109 K A -3.0627
110 G A -2.2712
111 Y A 0.0000
112 L A -1.3113
113 E A -2.4303
114 M A 0.0000
115 S A -1.1135
116 V A -0.9301
117 E A -1.4058
118 C A -0.6344
119 K A 0.0000
120 L A 0.0000
121 A A -0.3741
122 L A 0.0000
123 L A 0.0000
124 K A -0.7157
125 Y A -0.5580
126 L A 0.0000
127 C A 0.0000
128 E A -2.1167
129 C A -1.8040
130 Q A 0.0000
131 F A -1.3386
132 D A -2.5703
133 D A -2.6437
134 N A 0.0000
135 L A -0.3503
136 K A -1.5121
137 F A 0.0000
138 K A -1.4698
139 N A -1.4406
140 I A -1.0284
141 I A -1.7572
142 N A -2.8278
143 E A -3.4569
144 E A -3.7673
145 D A -3.8658
146 A A -2.7400
147 D A -3.2732
148 T A -2.4914
149 M A -2.4019
150 R A -2.8044
151 L A -1.3357
152 Q A -1.7349
153 P A -0.7414
154 I A -0.3029
155 G A -0.7627
156 R A -1.2896
157 D A 0.0000
158 K A -2.1543
159 D A -2.6650
160 G A -2.3996
161 L A -1.5359
162 M A 0.0000
163 Y A 0.0000
164 W A 0.0000
165 Y A 0.0965
166 Q A -0.2580
167 L A -0.6578
168 D A 0.0000
169 Q A -2.2376
170 D A -1.6222
171 H A -1.4766
172 N A -1.5959
173 V A 0.0000
174 R A 0.0000
175 M A 0.0000
176 Y A 0.0000
177 I A -0.5597
178 E A -1.4819
179 E A -2.7759
180 Q A -2.8525
181 D A -3.5256
182 D A -3.0268
183 Q A -3.1456
184 D A -2.8310
185 G A -2.2270
186 S A -1.5199
187 S A 0.0000
188 W A -1.1253
189 K A -1.3156
190 C A -0.3908
191 I A -0.0496
192 V A 0.0000
193 R A -2.0247
194 N A -2.8469
195 R A -3.0984
196 N A -2.9822
197 E A -2.5659
198 L A 0.0000
199 A A -1.6467
200 E A -1.6347
201 T A -0.4471
202 L A 0.0000
203 A A -0.2483
204 L A 0.6394
205 L A 0.0000
206 K A -1.0320
207 A A -0.4203
208 Q A -1.2478
209 I A 0.0000
210 D A -1.5509
211 P A -0.5400
212 V A 0.6757
213 L A -0.0598
214 L A -0.3409
215 K A -1.9935
216 N A -2.3703
217 S A -2.2748
218 S A -2.7247
219 Q A -3.6224
220 Q A -4.0010
221 D A -4.2581
222 N A -4.0900
223 S A -3.3376
224 S A -3.1112
225 R A -3.8739
226 E A -3.4478
227 S A -1.7504
228 P A -0.8546
229 S A -1.2736
230 L A -1.3953
231 E A -3.1659
232 D A -3.7832
233 E A -3.4472
234 E A -3.1466
235 T A -2.4048
236 K A -3.5491
237 K A -4.0511
238 E A -4.4444
239 E A -4.2566
240 E A -3.1018
241 T A -1.8347
242 P A -1.7002
243 K A -2.8233
244 Q A -3.3783
245 E A -3.9489
246 E A -4.0253
247 Q A -3.7936
248 K A -3.6791
249 E A -3.4266
250 S A -2.6482
251 E A -2.9046
252 K A -2.4939
253 M A -1.0878
254 K A -1.9336
255 S A -2.0696
256 E A -3.4785
257 E A -3.5142
258 Q A -2.5108
259 P A -1.0869
260 M A 0.1135
261 D A -0.8327
262 L A -0.2605
263 E A -2.5272
264 N A -2.9177
265 R A -3.0380
266 S A -1.4168
267 T A -0.8091
268 A A -0.3112
269 N A -0.0608
270 V A 1.4807
271 L A 0.6814
272 E A -1.7105
273 E A -2.5323
274 T A -1.0135
275 T A -0.1853
276 V A 0.3273
277 K A -2.4317
278 K A -3.6276
279 E A -4.2670
280 K A -4.6425
281 E A -4.5769
282 D A -4.5915
283 E A -4.7203
284 K A -3.8848
285 E A -2.1334
286 L A 0.8912
287 V A 1.6590
288 K A 0.2632
289 L A 1.3599
290 P A 1.8379
291 V A 3.3952
292 I A 3.3105
293 V A 2.6774
294 K A -0.0176
295 L A -0.0901
296 E A -2.4988
297 K A -2.3394
298 P A -1.7113
299 L A 0.0510
300 P A -1.2900
301 E A -2.6327
302 N A -3.4371
303 E A -4.0719
304 E A -4.1856
305 K A -3.4186
306 K A -1.6359
307 I A 1.4398
308 I A 1.5000
309 K A -1.7190
310 E A -3.3938
311 E A -3.7248
312 S A -2.5048
313 D A -1.9746
314 S A -0.3754
315 F A 0.2538
316 K A -2.0971
317 E A -2.6034
318 N A -1.9287
319 V A -0.1661
320 K A -0.9945
321 P A -0.1346
322 I A 1.0540
323 K A -0.3573
324 V A 1.2971
325 E A -0.4832
326 V A 0.4902
327 K A -1.7203
328 E A -1.7892
329 C A -1.3544
330 R A -2.4284
331 A A -1.8481
332 D A -2.6281
333 P A -2.6055
334 K A -3.2711
335 D A -3.1832
336 T A -2.3180
337 K A -2.5354
338 S A -1.1180
339 S A -0.5791
340 M A -0.4819
341 E A -2.1291
342 K A -2.2719
343 P A -1.7387
344 V A -0.7270
345 A A -1.3353
346 Q A -2.1031
347 E A -2.9280
348 P A -2.7963
349 E A -2.8192
350 R A -2.1975
351 I A 0.2083
352 E A -0.4302
353 F A 0.9452
354 G A -0.2460
355 G A -0.6902
356 N A -0.7578
357 I A 0.4111
358 K A -1.2258
359 S A -1.0480
360 S A -1.3857
361 H A -1.6230
362 E A -1.7727
363 I A -0.1919
364 T A -1.1844
365 E A -2.8635
366 K A -3.2084
367 S A -2.4505
368 T A -2.3315
369 E A -3.7113
370 E A -3.7418
371 T A -2.9696
372 E A -4.3884
373 K A -4.3162
374 L A -2.4951
375 K A -4.1149
376 N A -4.3631
377 D A -4.2715
378 Q A -3.6702
379 Q A -3.2331
380 A A -2.2246
381 K A -2.2464
382 I A -1.1349
383 P A -0.8779
384 L A -0.9176
385 K A -2.4083
386 K A -3.0610
387 R A -3.0639
388 E A -2.5329
389 I A -0.4781
390 K A -1.2751
391 L A -0.0411
392 S A -1.0401
393 D A -2.4508
394 D A -2.0056
395 F A 0.0847
396 D A -1.2493
397 S A -0.9456
398 P A -0.3882
399 V A 0.5530
400 K A -0.8842
401 G A -0.7387
402 P A 0.0288
403 L A 1.3132
404 C A 0.5637
405 K A -0.6774
406 S A -0.0408
407 V A 1.2031
408 T A 0.6022
409 P A -0.2489
410 T A -1.4664
411 K A -2.2970
412 E A -1.4663
413 F A 1.2749
414 L A 0.6266
415 K A -1.6857
416 D A -2.8635
417 E A -2.4144
418 I A -0.2169
419 K A -1.4499
420 Q A -1.7624
421 E A -2.5797
422 E A -3.0983
423 E A -2.7645
424 T A -1.5452
425 C A -1.0045
426 K A -1.8766
427 R A -1.6654
428 I A 0.1938
429 S A 0.3144
430 T A 0.7477
431 I A 1.7987
432 T A 1.1802
433 A A 1.2177
434 L A 1.2231
435 G A -0.5431
436 H A -1.7455
437 E A -3.0236
438 G A -2.5695
439 K A -2.6664
440 Q A -1.0705
441 L A 1.2925
442 V A 1.6120
443 N A -0.7129
444 G A -1.2727
445 E A -1.5266
446 V A 0.3551
447 S A -1.0534
448 D A -2.7803
449 E A -3.3610
450 R A -2.3795
451 V A 0.4922
452 A A 0.3665
453 P A 0.2936
454 N A -0.4420
455 F A 0.6747
456 K A -1.3943
457 T A -1.4025
458 E A -1.4392
459 P A -1.0135
460 I A 0.1297
461 E A -1.7728
462 T A -1.5587
463 K A -0.8032
464 F A 1.2072
465 Y A 0.9250
466 E A -1.3423
467 T A -2.0195
468 K A -3.5794
469 E A -3.7402
470 E A -2.9188
471 S A -0.7841
472 Y A 0.6629
473 S A 0.3664
474 P A -0.0639
475 S A -1.1324
476 K A -2.4729
477 D A -3.3010
478 R A -3.0792
479 N A -1.0924
480 I A 1.8195
481 I A 2.2451
482 T A 0.2709
483 E A -1.9380
484 G A -2.1631
485 N A -2.2426
486 G A -1.6419
487 T A -1.5737
488 E A -1.9565
489 S A -1.4685
490 L A -0.8900
491 N A -1.7337
492 S A -1.1714
493 V A 1.6285
494 I A 2.6176
495 T A 1.5699
496 S A 0.5499
497 M A -0.0401
498 K A -1.2945
499 T A -1.3516
500 G A -1.3016
501 E A -1.3052
502 L A -0.6799
503 E A -2.5628
504 K A -3.2209
505 E A -3.0826
506 T A -1.1422
507 A A -0.3343
508 P A 0.2208
509 L A -0.1997
510 R A -3.1134
511 K A -3.7087
512 D A -3.5697
513 A A -2.0775
514 D A -2.2708
515 S A -0.8217
516 S A 0.2722
517 I A 2.1303
518 S A 2.0093
519 V A 2.4347
520 L A 1.8135
521 E A 0.2306
522 I A 0.8934
523 H A -0.7703
524 S A -1.2442
525 Q A -2.4463
526 K A -2.6011
527 A A -1.3948
528 Q A -1.1282
529 I A 0.1843
530 E A -1.9582
531 E A -2.7857
532 P A -2.5283
533 D A -2.4583
534 P A -1.6725
535 P A -1.4259
536 E A -1.8327
537 M A -0.8026
538 E A -1.7310
539 T A -0.5586
540 S A -0.2567
541 L A 0.5439
542 D A -1.0044
543 S A -1.1213
544 S A -1.4854
545 E A -2.1277
546 M A -1.2652
547 A A -1.4785
548 K A -2.1349
549 D A -1.8608
550 L A 0.1152
551 S A -0.2457
552 S A -0.8763
553 K A -1.8740
554 T A -0.6354
555 A A 0.3572
556 L A 1.3875
557 S A 0.3609
558 S A -0.5158
559 T A -1.1393
560 E A -1.8855
561 S A -0.7432
562 C A 0.3831
563 T A 0.3768
564 M A 0.1365
565 K A -1.7021
566 G A -2.3224
567 E A -3.6641
568 E A -3.7816
569 K A -3.1784
570 S A -1.8577
571 P A -1.5161
572 K A -2.2641
573 T A -2.2507
574 K A -3.2935
575 K A -3.7860
576 D A -4.6292
577 K A -4.1425
578 R A -3.2137
579 P A -1.3840
580 P A 0.3753
581 I A 2.2791
582 L A 1.7405
583 E A -0.0424
584 C A 0.7379
585 L A 0.4406
586 E A -0.6622
587 K A -1.5179
588 L A -0.9170
589 E A -2.2497
590 K A -2.7850
591 S A -2.7482
592 K A -3.0180
593 K A -2.0086
594 T A -0.3108
595 F A 1.7601
596 L A 0.7308
597 D A -1.7160
598 K A -3.0044
599 D A -3.1717
600 A A -2.4536
601 Q A -2.1402
602 R A -1.6747
603 L A 0.1094
604 S A 0.4697
605 P A 0.9085
606 I A 1.3251
607 P A -0.4451
608 E A -2.0355
609 E A -1.8442
610 V A -0.0686
611 P A -0.5613
612 K A -1.4392
613 S A -0.9201
614 T A -0.0580
615 L A 0.3693
616 E A -1.8473
617 S A -2.3501
618 E A -3.2976
619 K A -3.0544
620 P A -1.7664
621 G A -1.1205
622 S A -1.0404
623 P A -1.3338
624 E A -1.9380
625 A A -1.4285
626 A A -1.3799
627 E A -1.8985
628 T A -1.2723
629 S A -0.8982
630 P A -0.7286
631 P A -0.7983
632 S A -0.3928
633 N A 0.0476
634 I A 1.9394
635 I A 1.7458
636 D A -0.8972
637 H A -1.5024
638 C A -1.2763
639 E A -2.4319
640 K A -1.7663
641 L A 0.1113
642 A A 0.0061
643 S A -1.2508
644 E A -2.9643
645 K A -3.0862
646 E A -1.8822
647 V A 1.1962
648 V A 1.2597
649 E A -0.5517
650 C A -0.4724
651 Q A -1.2993
652 S A -1.0796
653 T A -0.5502
654 S A -0.2459
655 T A 0.5722
656 V A 1.2412
657 G A 0.1055
658 G A -0.7823
659 Q A -1.3545
660 S A -0.6078
661 V A 0.2844
662 K A -1.7083
663 K A -1.5947
664 V A 0.1043
665 D A -1.0829
666 L A -0.0817
667 E A -1.2356
668 T A -0.4908
669 L A -0.3797
670 K A -2.1801
671 E A -3.6981
672 D A -3.4210
673 S A -2.6340
674 E A -1.7944
675 F A 0.2486
676 T A -0.1783
677 K A -1.0512
678 V A 0.2300
679 E A -1.0416
680 M A -0.7055
681 D A -1.9652
682 N A -1.4587
683 L A -0.7032
684 D A -1.9853
685 N A -2.1511
686 A A -1.5918
687 Q A -1.5306
688 T A -0.9415
689 S A -0.2623
690 G A 0.1029
691 I A 0.4804
692 E A -1.9115
693 E A -2.7035
694 P A -2.1603
695 S A -1.9044
696 E A -2.6398
697 T A -2.0778
698 K A -2.3063
699 G A -1.3415
700 S A -0.6732
701 M A -0.3476
702 Q A -1.9177
703 K A -2.6447
704 S A -1.9309
705 K A -1.6422
706 F A 0.3409
707 K A -0.8379
708 Y A 0.3761
709 K A -0.0797
710 L A 2.0120
711 V A 2.2631
712 P A 0.6039
713 E A -2.1056
714 E A -3.1666
715 E A -3.0357
716 T A -1.3229
717 T A -0.3703
718 A A -0.2862
719 S A -1.3675
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1121 V A 1.6999
1122 S A -0.3911
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1128 E A -3.3449
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1140 D A -2.7415
1141 T A -1.5866
1142 D A -1.1956
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1144 C A 1.0219
1145 S A -0.8402
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1156 M A -0.6861
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1300 L A -0.6021
1301 H A -1.3314
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1303 I A 0.0389
1304 E A -1.8354
1305 T A -1.9493
1306 D A -3.4553
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1408 G A -1.1558
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1423 D A -3.6166
1424 E A -2.8651
1425 L A -0.0199
1426 L A 0.1770
1427 R A -1.1337
1428 V A 1.3480
1429 T A 1.0206
1430 D A 0.2783
1431 L A 2.4626
1432 V A 2.8150
1433 D A 1.0253
1434 Y A 1.9925
1435 V A 2.4874
1436 C A 1.1456
1437 N A -0.2029
1438 S A 0.0687
1439 E A -1.6550
1440 Q A -0.6318
1441 L A 0.5930
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Laboratory of Theory of Biopolymers 2018