Project name: query_structure

Status: done

Started: 2026-03-16 21:27:32
Settings
Chain sequence(s) A: MKGTFLICLILIAGFSFKSTQAGSICLEPKVVGPCTAYFRRFYFDSETGKCTVFIYGGCEGNGNNFETLRACRAICRA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:33)
Show buried residues

Minimal score value
-2.8251
Maximal score value
4.8028
Average score
0.0568
Total score value
4.4327

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.0660
2 K A -1.4258
3 G A -0.5076
4 T A 1.2447
5 F A 3.2774
6 L A 4.1119
7 I A 4.6877
8 C A 4.2364
9 L A 4.4834
10 I A 4.8028
11 L A 4.3928
12 I A 3.9475
13 A A 2.3548
14 G A 1.7808
15 F A 2.5797
16 S A 1.1575
17 F A 1.4786
18 K A -0.8474
19 S A -0.8686
20 T A -0.9690
21 Q A -1.5245
22 A A -0.6013
23 G A -0.5586
24 S A -0.1868
25 I A 0.2462
26 C A 0.0000
27 L A 0.7835
28 E A -0.2686
29 P A -0.6459
30 K A -0.8679
31 V A -0.0675
32 V A 1.3540
33 G A -0.0212
34 P A -0.0698
35 C A 0.3815
36 T A 0.8051
37 A A 1.0649
38 Y A 1.7649
39 F A 0.9893
40 R A -0.9952
41 R A -0.7059
42 F A -0.8727
43 Y A 0.0000
44 F A -0.9490
45 D A -1.4203
46 S A -1.3177
47 E A -2.1836
48 T A -1.7274
49 G A -1.9029
50 K A -2.4948
51 C A -1.3804
52 T A -0.1792
53 V A 0.0095
54 F A 0.0000
55 I A 0.9983
56 Y A 0.7867
57 G A 0.0000
58 G A 0.3089
59 C A -0.3200
60 E A -1.5321
61 G A -1.0081
62 N A -1.0509
63 G A -0.5437
64 N A 0.0000
65 N A -0.8364
66 F A 0.0000
67 E A -2.1483
68 T A -1.7308
69 L A -1.2968
70 R A -2.3343
71 A A -1.6683
72 C A 0.0000
73 R A -2.8251
74 A A -1.5161
75 I A -0.7409
76 C A 0.0000
77 R A -2.4395
78 A A -2.1112
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Laboratory of Theory of Biopolymers 2018