| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDPPRCRRIRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGMPGLKIPRKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.3560 | |
| 2 | S | A | -0.1418 | |
| 3 | D | A | -1.0151 | |
| 4 | V | A | -0.8382 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.4233 | |
| 7 | D | A | -2.8228 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9376 | |
| 10 | V | A | 0.0749 | |
| 11 | V | A | 1.5095 | |
| 12 | A | A | 0.8669 | |
| 13 | A | A | 0.2762 | |
| 14 | T | A | -0.6028 | |
| 15 | P | A | -1.1563 | |
| 16 | T | A | -1.0130 | |
| 17 | S | A | -0.5562 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.6885 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.8920 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.4045 | |
| 24 | P | A | -1.9291 | |
| 25 | P | A | 0.0000 | |
| 26 | R | A | -2.5073 | |
| 27 | C | A | -2.0625 | |
| 28 | R | A | -3.4390 | |
| 29 | R | A | -3.2773 | |
| 30 | I | A | -2.1939 | |
| 31 | R | A | -2.2811 | |
| 32 | Y | A | -1.0811 | |
| 33 | Y | A | 0.0000 | |
| 34 | R | A | -0.8219 | |
| 35 | I | A | 0.0000 | |
| 36 | T | A | -0.5125 | |
| 37 | Y | A | -0.1535 | |
| 38 | G | A | 0.0000 | |
| 39 | E | A | -1.4233 | |
| 40 | T | A | -1.1697 | |
| 41 | G | A | -1.1626 | |
| 42 | G | A | -1.3001 | |
| 43 | N | A | -1.5097 | |
| 44 | S | A | -0.8033 | |
| 45 | P | A | -0.2523 | |
| 46 | V | A | 0.5573 | |
| 47 | Q | A | -0.6411 | |
| 48 | E | A | -1.4966 | |
| 49 | F | A | -0.7161 | |
| 50 | T | A | -0.3616 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.1236 | |
| 53 | G | A | -1.7837 | |
| 54 | S | A | -1.5570 | |
| 55 | K | A | -1.9592 | |
| 56 | S | A | -1.2710 | |
| 57 | T | A | -0.6697 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2190 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6690 | |
| 62 | G | A | -1.0388 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3515 | |
| 65 | P | A | -1.6467 | |
| 66 | G | A | -1.4145 | |
| 67 | V | A | -1.4220 | |
| 68 | D | A | -1.9816 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.6331 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | -0.2782 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | -0.0935 | |
| 75 | A | A | -0.4467 | |
| 76 | V | A | -0.4026 | |
| 77 | T | A | -1.1453 | |
| 78 | G | A | -1.0596 | |
| 79 | M | A | -0.5416 | |
| 80 | P | A | -0.4875 | |
| 81 | G | A | -0.2867 | |
| 82 | L | A | 0.4405 | |
| 83 | K | A | -0.5532 | |
| 84 | I | A | 0.9479 | |
| 85 | P | A | -0.0119 | |
| 86 | R | A | -0.5094 | |
| 87 | K | A | -1.4585 | |
| 88 | P | A | -0.8338 | |
| 89 | I | A | -0.3353 | |
| 90 | S | A | -0.3861 | |
| 91 | I | A | -0.6011 | |
| 92 | N | A | -1.6520 | |
| 93 | Y | A | -1.3961 | |
| 94 | R | A | -2.4872 | |
| 95 | T | A | -1.6250 |