| Chain sequence(s) |
H: EVQLQQSGAELARPGASVKMSCKASGYTFTSYTIHWLKQRPGQGLEWIGYINPSSGYTNYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYFCARGTTAFAYWGQGTLVTVSS
L: DIKMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPLTFGAGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:21)
[INFO] Main: Simulation completed successfully. (00:02:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9881 | |
| 2 | V | H | -0.8762 | |
| 3 | Q | H | -1.5228 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.0397 | |
| 6 | Q | H | -1.3412 | |
| 7 | S | H | -0.8628 | |
| 8 | G | H | -0.5012 | |
| 9 | A | H | 0.3830 | |
| 11 | E | H | 0.0527 | |
| 12 | L | H | 0.8786 | |
| 13 | A | H | -0.6033 | |
| 14 | R | H | -1.9361 | |
| 15 | P | H | -1.6983 | |
| 16 | G | H | -1.2424 | |
| 17 | A | H | -1.0447 | |
| 18 | S | H | -1.0654 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.3264 | |
| 21 | M | H | 0.0000 | |
| 22 | S | H | -0.7079 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.4714 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.1375 | |
| 27 | G | H | -1.1120 | |
| 28 | Y | H | -0.4226 | |
| 29 | T | H | -0.0605 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.5710 | |
| 36 | S | H | -0.1058 | |
| 37 | Y | H | 0.2083 | |
| 38 | T | H | 0.0847 | |
| 39 | I | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | L | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.5649 | |
| 45 | R | H | -1.0714 | |
| 46 | P | H | -0.7748 | |
| 47 | G | H | -1.1533 | |
| 48 | Q | H | -1.4499 | |
| 49 | G | H | -0.9052 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8981 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | Y | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.0871 | |
| 58 | P | H | 0.0000 | |
| 59 | S | H | -0.5364 | |
| 62 | S | H | -0.2401 | |
| 63 | G | H | -0.1407 | |
| 64 | Y | H | 0.9161 | |
| 65 | T | H | 0.3433 | |
| 66 | N | H | -0.1266 | |
| 67 | Y | H | -0.9950 | |
| 68 | N | H | -1.7681 | |
| 69 | Q | H | -2.7033 | |
| 70 | K | H | -3.0540 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.1279 | |
| 74 | D | H | -3.0565 | |
| 75 | K | H | -2.1001 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.8709 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.2998 | |
| 80 | A | H | -0.7061 | |
| 81 | D | H | -1.4508 | |
| 82 | K | H | -1.8424 | |
| 83 | S | H | -1.0904 | |
| 84 | S | H | -0.9035 | |
| 85 | S | H | -1.0230 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2636 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -0.9981 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.0483 | |
| 93 | S | H | -1.0654 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2600 | |
| 96 | S | H | -1.2947 | |
| 97 | E | H | -1.6728 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.2981 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.6418 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | T | H | -0.0321 | |
| 109 | T | H | 0.2623 | |
| 114 | A | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | A | H | 0.2103 | |
| 117 | Y | H | 0.4081 | |
| 118 | W | H | -0.2414 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.5809 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.3628 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1856 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7086 | |
| 128 | S | H | -0.8580 | |
| 1 | D | L | -2.2032 | |
| 2 | I | L | 0.0000 | |
| 3 | K | L | -2.6938 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.2866 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.5696 | |
| 8 | P | L | -0.4460 | |
| 9 | S | L | -0.6117 | |
| 10 | S | L | -1.0083 | |
| 11 | L | L | -0.6178 | |
| 12 | S | L | -0.9973 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.9245 | |
| 15 | L | L | -0.5052 | |
| 16 | G | L | -1.3056 | |
| 17 | E | L | -1.9200 | |
| 18 | R | L | -2.3487 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.6224 | |
| 21 | L | L | 0.0000 | |
| 22 | T | L | -0.8330 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.9141 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.4470 | |
| 27 | Q | L | -2.8244 | |
| 28 | E | L | -2.3595 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.5790 | |
| 37 | G | L | -0.0383 | |
| 38 | Y | L | 1.0921 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | L | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.5181 | |
| 46 | P | L | -1.3757 | |
| 47 | D | L | -2.2565 | |
| 48 | G | L | -1.5247 | |
| 49 | T | L | -1.2376 | |
| 50 | I | L | 0.0000 | |
| 51 | K | L | -0.8308 | |
| 52 | R | L | -0.4337 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.6034 | |
| 56 | A | L | 0.4211 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.2652 | |
| 66 | T | L | 0.0130 | |
| 67 | L | L | -0.3243 | |
| 68 | D | L | -0.5797 | |
| 69 | S | L | -0.5211 | |
| 70 | G | L | -0.8446 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.1230 | |
| 74 | K | L | -1.9125 | |
| 75 | R | L | -1.5098 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.6454 | |
| 78 | G | L | -0.4748 | |
| 79 | S | L | -1.0009 | |
| 80 | R | L | -1.8189 | |
| 83 | S | L | -1.3641 | |
| 84 | G | L | -1.4673 | |
| 85 | S | L | -2.0037 | |
| 86 | D | L | -1.9295 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.8791 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6363 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.5738 | |
| 93 | S | L | -1.5611 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.9882 | |
| 96 | S | L | -1.4116 | |
| 97 | E | L | -1.9072 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -1.0661 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -1.1753 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.7841 | |
| 108 | A | L | 0.4444 | |
| 109 | S | L | 0.4271 | |
| 114 | Y | L | 0.7176 | |
| 115 | P | L | -0.1940 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.5119 | |
| 118 | F | L | -0.2354 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.5189 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.6414 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.6845 | |
| 126 | L | L | 0.0017 | |
| 127 | K | L | -1.2749 |