Project name: 2510-4.pdb

Status: done

Started: 2026-03-11 09:26:52
Settings
Chain sequence(s) H: EVQLQQSGAELARPGASVKMSCKASGYTFTSYTIHWLKQRPGQGLEWIGYINPSSGYTNYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYFCARGTTAFAYWGQGTLVTVSS
L: DIKMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPLTFGAGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:23)
Show buried residues

Minimal score value
-3.1279
Maximal score value
1.3628
Average score
-0.5952
Total score value
-132.7351

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9881
2 V H -0.8762
3 Q H -1.5228
4 L H 0.0000
5 Q H -2.0397
6 Q H -1.3412
7 S H -0.8628
8 G H -0.5012
9 A H 0.3830
11 E H 0.0527
12 L H 0.8786
13 A H -0.6033
14 R H -1.9361
15 P H -1.6983
16 G H -1.2424
17 A H -1.0447
18 S H -1.0654
19 V H 0.0000
20 K H -1.3264
21 M H 0.0000
22 S H -0.7079
23 C H 0.0000
24 K H -1.4714
25 A H 0.0000
26 S H -1.1375
27 G H -1.1120
28 Y H -0.4226
29 T H -0.0605
30 F H 0.0000
35 T H -0.5710
36 S H -0.1058
37 Y H 0.2083
38 T H 0.0847
39 I H 0.0000
40 H H 0.0000
41 W H 0.0000
42 L H 0.0000
43 K H 0.0000
44 Q H -0.5649
45 R H -1.0714
46 P H -0.7748
47 G H -1.1533
48 Q H -1.4499
49 G H -0.9052
50 L H 0.0000
51 E H -0.8981
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 Y H 0.0000
56 I H 0.0000
57 N H -0.0871
58 P H 0.0000
59 S H -0.5364
62 S H -0.2401
63 G H -0.1407
64 Y H 0.9161
65 T H 0.3433
66 N H -0.1266
67 Y H -0.9950
68 N H -1.7681
69 Q H -2.7033
70 K H -3.0540
71 F H 0.0000
72 K H -3.1279
74 D H -3.0565
75 K H -2.1001
76 A H 0.0000
77 T H -0.8709
78 L H 0.0000
79 T H -0.2998
80 A H -0.7061
81 D H -1.4508
82 K H -1.8424
83 S H -1.0904
84 S H -0.9035
85 S H -1.0230
86 T H 0.0000
87 A H 0.0000
88 Y H -0.2636
89 M H 0.0000
90 Q H -0.9981
91 L H 0.0000
92 S H -1.0483
93 S H -1.0654
94 L H 0.0000
95 T H -1.2600
96 S H -1.2947
97 E H -1.6728
98 D H 0.0000
99 S H -0.2981
100 A H 0.0000
101 V H 0.6418
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 G H 0.0000
108 T H -0.0321
109 T H 0.2623
114 A H 0.0000
115 F H 0.0000
116 A H 0.2103
117 Y H 0.4081
118 W H -0.2414
119 G H 0.0000
120 Q H -1.5809
121 G H 0.0000
122 T H 0.0000
123 L H 1.3628
124 V H 0.0000
125 T H 0.1856
126 V H 0.0000
127 S H -0.7086
128 S H -0.8580
1 D L -2.2032
2 I L 0.0000
3 K L -2.6938
4 M L 0.0000
5 T L -1.2866
6 Q L 0.0000
7 S L -0.5696
8 P L -0.4460
9 S L -0.6117
10 S L -1.0083
11 L L -0.6178
12 S L -0.9973
13 A L 0.0000
14 S L -0.9245
15 L L -0.5052
16 G L -1.3056
17 E L -1.9200
18 R L -2.3487
19 V L 0.0000
20 S L -0.6224
21 L L 0.0000
22 T L -0.8330
23 C L 0.0000
24 R L -2.9141
25 A L 0.0000
26 S L -2.4470
27 Q L -2.8244
28 E L -2.3595
29 I L 0.0000
36 S L -0.5790
37 G L -0.0383
38 Y L 1.0921
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 L L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.5181
46 P L -1.3757
47 D L -2.2565
48 G L -1.5247
49 T L -1.2376
50 I L 0.0000
51 K L -0.8308
52 R L -0.4337
53 L L 0.0000
54 I L 0.0000
55 Y L 0.6034
56 A L 0.4211
57 A L 0.0000
65 S L -0.2652
66 T L 0.0130
67 L L -0.3243
68 D L -0.5797
69 S L -0.5211
70 G L -0.8446
71 V L 0.0000
72 P L -1.1230
74 K L -1.9125
75 R L -1.5098
76 F L 0.0000
77 S L -0.6454
78 G L -0.4748
79 S L -1.0009
80 R L -1.8189
83 S L -1.3641
84 G L -1.4673
85 S L -2.0037
86 D L -1.9295
87 Y L 0.0000
88 S L -0.8791
89 L L 0.0000
90 T L -0.6363
91 I L 0.0000
92 S L -1.5738
93 S L -1.5611
94 L L 0.0000
95 E L -1.9882
96 S L -1.4116
97 E L -1.9072
98 D L 0.0000
99 F L -1.0661
100 A L 0.0000
101 D L -1.1753
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.7841
108 A L 0.4444
109 S L 0.4271
114 Y L 0.7176
115 P L -0.1940
116 L L 0.0000
117 T L -0.5119
118 F L -0.2354
119 G L 0.0000
120 A L -0.5189
121 G L 0.0000
122 T L 0.0000
123 K L -1.6414
124 L L 0.0000
125 E L -1.6845
126 L L 0.0017
127 K L -1.2749
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Laboratory of Theory of Biopolymers 2018