| Chain sequence(s) |
A: MLALAYGGSLALAYGGSLALAYGGSLALAYGGSLALAYGGS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 2.4648 | |
| 2 | L | A | 2.8381 | |
| 3 | A | A | 2.1597 | |
| 4 | L | A | 2.7419 | |
| 5 | A | A | 2.1805 | |
| 6 | Y | A | 2.6362 | |
| 7 | G | A | 1.6547 | |
| 8 | G | A | 1.6441 | |
| 9 | S | A | 1.7526 | |
| 10 | L | A | 2.6143 | |
| 11 | A | A | 1.7996 | |
| 12 | L | A | 2.4098 | |
| 13 | A | A | 1.8911 | |
| 14 | Y | A | 2.5225 | |
| 15 | G | A | 1.7331 | |
| 16 | G | A | 1.7580 | |
| 17 | S | A | 1.8105 | |
| 18 | L | A | 2.6789 | |
| 19 | A | A | 2.0165 | |
| 20 | L | A | 2.4294 | |
| 21 | A | A | 1.8986 | |
| 22 | Y | A | 2.5088 | |
| 23 | G | A | 1.7415 | |
| 24 | G | A | 1.7369 | |
| 25 | S | A | 1.7138 | |
| 26 | L | A | 2.3460 | |
| 27 | A | A | 1.9310 | |
| 28 | L | A | 2.2655 | |
| 29 | A | A | 1.6921 | |
| 30 | Y | A | 2.2271 | |
| 31 | G | A | 1.4751 | |
| 32 | G | A | 1.4670 | |
| 33 | S | A | 1.4036 | |
| 34 | L | A | 1.7142 | |
| 35 | A | A | 1.4306 | |
| 36 | L | A | 1.8337 | |
| 37 | A | A | 1.2694 | |
| 38 | Y | A | 1.5242 | |
| 39 | G | A | 0.4896 | |
| 40 | G | A | 0.2027 | |
| 41 | S | A | 0.0031 |