| Chain sequence(s) |
A: NLKKAQNNLLNSQIKDAVDATVSFYQTLTEKYGEKYSKMAQELADKSKGKKIGNVNEALAAFEKYKDVLNKKFSKADRDAIFNALASVKYDDWAKHLDQFAKYLKITGHVSFGYDVVSDILKIKDTGDWKPLFLTLEKKAADAGVSYVVALLFSLLAGTTLGIWGIAIVTGILCSYIDKNKLNTINEVLGI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:31)
[INFO] Main: Simulation completed successfully. (00:05:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.6981 | |
| 2 | L | A | -0.8446 | |
| 3 | K | A | -2.8736 | |
| 4 | K | A | -3.1897 | |
| 5 | A | A | -2.0551 | |
| 6 | Q | A | -2.3493 | |
| 7 | N | A | -2.5609 | |
| 8 | N | A | -2.0483 | |
| 9 | L | A | -0.1495 | |
| 10 | L | A | -0.3016 | |
| 11 | N | A | -1.2901 | |
| 12 | S | A | -1.2950 | |
| 13 | Q | A | -1.4642 | |
| 14 | I | A | -0.4059 | |
| 15 | K | A | -2.0810 | |
| 16 | D | A | -2.6797 | |
| 17 | A | A | 0.0000 | |
| 18 | V | A | 0.2510 | |
| 19 | D | A | -1.4587 | |
| 20 | A | A | -0.8701 | |
| 21 | T | A | 0.0772 | |
| 22 | V | A | 1.2409 | |
| 23 | S | A | 0.2106 | |
| 24 | F | A | 0.0000 | |
| 25 | Y | A | -0.4957 | |
| 26 | Q | A | -1.0449 | |
| 27 | T | A | -0.8548 | |
| 28 | L | A | 0.0000 | |
| 29 | T | A | -2.5187 | |
| 30 | E | A | -2.6528 | |
| 31 | K | A | -1.9167 | |
| 32 | Y | A | -1.4153 | |
| 33 | G | A | -2.4234 | |
| 34 | E | A | -3.5617 | |
| 35 | K | A | -3.3743 | |
| 36 | Y | A | 0.0000 | |
| 37 | S | A | 0.0000 | |
| 38 | K | A | -3.3159 | |
| 39 | M | A | 0.0000 | |
| 40 | A | A | 0.0000 | |
| 41 | Q | A | -2.5342 | |
| 42 | E | A | -2.7481 | |
| 43 | L | A | 0.0000 | |
| 44 | A | A | 0.0000 | |
| 45 | D | A | -2.5398 | |
| 46 | K | A | -2.5870 | |
| 47 | S | A | 0.0000 | |
| 48 | K | A | -2.8405 | |
| 49 | G | A | -2.5387 | |
| 50 | K | A | -2.6262 | |
| 51 | K | A | -2.9938 | |
| 52 | I | A | 0.0000 | |
| 53 | G | A | -2.2279 | |
| 54 | N | A | -2.7560 | |
| 55 | V | A | 0.0000 | |
| 56 | N | A | -2.6998 | |
| 57 | E | A | -3.1778 | |
| 58 | A | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | A | A | -1.9335 | |
| 61 | A | A | 0.0000 | |
| 62 | F | A | 0.0000 | |
| 63 | E | A | -2.7221 | |
| 64 | K | A | -2.5627 | |
| 65 | Y | A | -1.7513 | |
| 66 | K | A | -2.1165 | |
| 67 | D | A | -2.9875 | |
| 68 | V | A | -1.3828 | |
| 69 | L | A | 0.0000 | |
| 70 | N | A | -2.6425 | |
| 71 | K | A | -2.9098 | |
| 72 | K | A | -2.4828 | |
| 73 | F | A | -1.6296 | |
| 74 | S | A | -2.0547 | |
| 75 | K | A | -2.6265 | |
| 76 | A | A | -1.4226 | |
| 77 | D | A | -1.8381 | |
| 78 | R | A | -1.8861 | |
| 79 | D | A | -1.6466 | |
| 80 | A | A | -1.0843 | |
| 81 | I | A | -0.4558 | |
| 82 | F | A | -0.7184 | |
| 83 | N | A | -1.0708 | |
| 84 | A | A | -0.5748 | |
| 85 | L | A | 0.0000 | |
| 86 | A | A | -0.4846 | |
| 87 | S | A | -0.7339 | |
| 88 | V | A | -1.1580 | |
| 89 | K | A | -2.3836 | |
| 90 | Y | A | -1.5365 | |
| 91 | D | A | -2.9234 | |
| 92 | D | A | -3.0277 | |
| 93 | W | A | 0.0000 | |
| 94 | A | A | -2.3873 | |
| 95 | K | A | -3.4887 | |
| 96 | H | A | -2.3538 | |
| 97 | L | A | 0.0000 | |
| 98 | D | A | -3.1594 | |
| 99 | Q | A | -2.9140 | |
| 100 | F | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | K | A | -2.2047 | |
| 103 | Y | A | -1.1912 | |
| 104 | L | A | 0.0000 | |
| 105 | K | A | -2.1550 | |
| 106 | I | A | -1.8148 | |
| 107 | T | A | -1.2448 | |
| 108 | G | A | -1.4471 | |
| 109 | H | A | -1.3684 | |
| 110 | V | A | -0.9150 | |
| 111 | S | A | -0.6046 | |
| 112 | F | A | 0.2354 | |
| 113 | G | A | 0.1816 | |
| 114 | Y | A | 0.5545 | |
| 115 | D | A | -0.7934 | |
| 116 | V | A | 0.0000 | |
| 117 | V | A | 0.0000 | |
| 118 | S | A | -0.2159 | |
| 119 | D | A | 0.0000 | |
| 120 | I | A | -0.6648 | |
| 121 | L | A | -0.7088 | |
| 122 | K | A | -2.3314 | |
| 123 | I | A | 0.0000 | |
| 124 | K | A | -3.0775 | |
| 125 | D | A | -3.2392 | |
| 126 | T | A | -2.3674 | |
| 127 | G | A | -2.3575 | |
| 128 | D | A | -2.6923 | |
| 129 | W | A | -1.6324 | |
| 130 | K | A | -1.6634 | |
| 131 | P | A | -1.0480 | |
| 132 | L | A | 0.0000 | |
| 133 | F | A | 0.0000 | |
| 134 | L | A | -0.6116 | |
| 135 | T | A | 0.0000 | |
| 136 | L | A | 0.0000 | |
| 137 | E | A | -1.9356 | |
| 138 | K | A | -2.2132 | |
| 139 | K | A | -1.6865 | |
| 140 | A | A | 0.0000 | |
| 141 | A | A | -1.9013 | |
| 142 | D | A | -2.4523 | |
| 143 | A | A | -1.8924 | |
| 144 | G | A | 0.0000 | |
| 145 | V | A | 0.0000 | |
| 146 | S | A | 0.0000 | |
| 147 | Y | A | 0.0000 | |
| 148 | V | A | 0.0000 | |
| 149 | V | A | 0.0000 | |
| 150 | A | A | 0.0000 | |
| 151 | L | A | 0.0000 | |
| 152 | L | A | 0.0000 | |
| 153 | F | A | 0.0000 | |
| 154 | S | A | 0.0000 | |
| 155 | L | A | 0.0000 | |
| 156 | L | A | 0.0000 | |
| 157 | A | A | 0.0000 | |
| 158 | G | A | -1.1499 | |
| 159 | T | A | 0.0000 | |
| 160 | T | A | -0.1894 | |
| 161 | L | A | 0.0000 | |
| 162 | G | A | -0.1085 | |
| 163 | I | A | 0.7923 | |
| 164 | W | A | 0.0000 | |
| 165 | G | A | 0.0000 | |
| 166 | I | A | 0.0000 | |
| 167 | A | A | 0.0000 | |
| 168 | I | A | 0.0000 | |
| 169 | V | A | 0.0000 | |
| 170 | T | A | 0.0000 | |
| 171 | G | A | 0.0000 | |
| 172 | I | A | 0.0000 | |
| 173 | L | A | 0.0000 | |
| 174 | C | A | 0.0000 | |
| 175 | S | A | 0.0000 | |
| 176 | Y | A | 0.0000 | |
| 177 | I | A | 0.0000 | |
| 178 | D | A | -1.6535 | |
| 179 | K | A | -2.5201 | |
| 180 | N | A | -2.4647 | |
| 181 | K | A | -1.9048 | |
| 182 | L | A | -1.8967 | |
| 183 | N | A | -2.1811 | |
| 184 | T | A | -1.7298 | |
| 185 | I | A | 0.0000 | |
| 186 | N | A | -1.2793 | |
| 187 | E | A | -2.2060 | |
| 188 | V | A | -1.7154 | |
| 189 | L | A | -0.4787 | |
| 190 | G | A | -0.6033 | |
| 191 | I | A | -0.0994 |