| Chain sequence(s) |
A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSHYEITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVAAYHSYHDIFYAVSPSSINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:22)
[INFO] Main: Simulation completed successfully. (00:00:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4340 | |
| 2 | S | A | -0.1661 | |
| 3 | S | A | 0.3704 | |
| 4 | V | A | 1.4903 | |
| 5 | S | A | 0.6355 | |
| 6 | S | A | 0.2557 | |
| 7 | V | A | -0.0556 | |
| 8 | P | A | 0.0000 | |
| 9 | T | A | -1.5392 | |
| 10 | K | A | -2.5534 | |
| 11 | L | A | -1.5759 | |
| 12 | E | A | -1.6215 | |
| 13 | V | A | 0.2585 | |
| 14 | V | A | 1.6166 | |
| 15 | A | A | 0.9225 | |
| 16 | A | A | 0.2977 | |
| 17 | T | A | -0.3832 | |
| 18 | P | A | -0.8285 | |
| 19 | T | A | -0.5483 | |
| 20 | S | A | -0.3146 | |
| 21 | L | A | 0.0000 | |
| 22 | L | A | 0.7704 | |
| 23 | I | A | 0.0000 | |
| 24 | S | A | -0.6588 | |
| 25 | W | A | 0.0000 | |
| 26 | D | A | -2.4974 | |
| 27 | A | A | -1.1822 | |
| 28 | S | A | -0.7692 | |
| 29 | S | A | -0.6196 | |
| 30 | S | A | -0.4286 | |
| 31 | S | A | -0.2054 | |
| 32 | V | A | 0.2821 | |
| 33 | S | A | 0.2596 | |
| 34 | H | A | -0.2128 | |
| 35 | Y | A | 0.0000 | |
| 36 | E | A | -0.7666 | |
| 37 | I | A | 0.0000 | |
| 38 | T | A | -0.5973 | |
| 39 | Y | A | -0.2578 | |
| 40 | G | A | 0.0000 | |
| 41 | E | A | -1.3740 | |
| 42 | T | A | -1.2500 | |
| 43 | G | A | -1.3494 | |
| 44 | G | A | -1.2601 | |
| 45 | N | A | -1.6859 | |
| 46 | S | A | -0.8420 | |
| 47 | P | A | -0.2837 | |
| 48 | V | A | 0.4710 | |
| 49 | Q | A | -0.7895 | |
| 50 | E | A | -1.6103 | |
| 51 | F | A | -0.5983 | |
| 52 | T | A | -0.3731 | |
| 53 | V | A | -0.1199 | |
| 54 | P | A | -0.4143 | |
| 55 | G | A | -0.4515 | |
| 56 | S | A | -0.4219 | |
| 57 | S | A | -0.4608 | |
| 58 | S | A | -0.6554 | |
| 59 | T | A | -0.2171 | |
| 60 | A | A | 0.0000 | |
| 61 | T | A | 0.2496 | |
| 62 | I | A | 0.0000 | |
| 63 | S | A | -0.4721 | |
| 64 | G | A | -0.6846 | |
| 65 | L | A | 0.0000 | |
| 66 | S | A | -0.8486 | |
| 67 | P | A | -1.0228 | |
| 68 | G | A | -1.1082 | |
| 69 | V | A | -0.9511 | |
| 70 | D | A | -1.6818 | |
| 71 | Y | A | -0.9830 | |
| 72 | T | A | -0.6933 | |
| 73 | I | A | 0.0000 | |
| 74 | T | A | -0.5157 | |
| 75 | V | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | A | A | 0.0000 | |
| 78 | Y | A | 1.2586 | |
| 79 | H | A | 1.2415 | |
| 80 | S | A | 1.2140 | |
| 81 | Y | A | 1.4747 | |
| 82 | H | A | -0.4317 | |
| 83 | D | A | -0.5037 | |
| 84 | I | A | 2.1602 | |
| 85 | F | A | 3.0624 | |
| 86 | Y | A | 2.6449 | |
| 87 | A | A | 1.3412 | |
| 88 | V | A | 0.8430 | |
| 89 | S | A | 0.1402 | |
| 90 | P | A | -0.1776 | |
| 91 | S | A | -0.4562 | |
| 92 | S | A | -0.6250 | |
| 93 | I | A | -0.6656 | |
| 94 | N | A | -1.6126 | |
| 95 | Y | A | -1.3413 | |
| 96 | R | A | -2.2923 | |
| 97 | T | A | -1.1760 |