Project name: query_structure

Status: done

Started: 2026-03-16 20:09:57
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Chain sequence(s) A: EVVAATPTSLLISWDAPAVTVRYYRITYGREVQKYSDLGPLYIYQEFTVPGSKSTATISGLKPGVDYTITVYAVTGSGESPASSKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:40)
Show buried residues

Minimal score value
-3.1548
Maximal score value
2.2151
Average score
-0.5147
Total score value
-47.8657

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -1.3657
2 V A 0.3891
3 V A 1.6175
4 A A 0.9312
5 A A 0.3214
6 T A -0.5404
7 P A -1.1776
8 T A -1.0391
9 S A -0.5338
10 L A 0.0000
11 L A 0.8040
12 I A 0.0000
13 S A -0.6178
14 W A 0.0000
15 D A -2.1088
16 A A -0.8424
17 P A -0.0709
18 A A 0.6783
19 V A 1.5762
20 T A 0.4091
21 V A -0.4402
22 R A -1.5492
23 Y A -0.8635
24 Y A 0.0000
25 R A -0.8693
26 I A 0.0000
27 T A -0.7737
28 Y A -0.1390
29 G A 0.0000
30 R A -0.4743
31 E A -0.0677
32 V A 0.8628
33 Q A -0.3740
34 K A -1.3796
35 Y A 0.1842
36 S A -0.2070
37 D A -0.9743
38 L A 0.8312
39 G A -0.0312
40 P A -0.1720
41 L A 0.9242
42 Y A 1.5047
43 I A 2.2151
44 Y A 1.0746
45 Q A -0.9369
46 E A -1.9241
47 F A -0.7685
48 T A -0.2995
49 V A 0.0000
50 P A -1.0408
51 G A -1.2712
52 S A -1.2728
53 K A -1.8525
54 S A -1.3049
55 T A -0.7081
56 A A 0.0000
57 T A 0.2196
58 I A 0.0000
59 S A -0.6649
60 G A -1.0428
61 L A 0.0000
62 K A -2.5997
63 P A -1.9074
64 G A -1.8811
65 V A 0.0000
66 D A -3.1512
67 Y A 0.0000
68 T A -0.7755
69 I A 0.0000
70 T A 0.0000
71 V A 0.0000
72 Y A -0.1647
73 A A 0.0000
74 V A 0.0000
75 T A -0.3141
76 G A -0.9184
77 S A -1.0740
78 G A -1.4944
79 E A -2.2244
80 S A -1.3924
81 P A -1.1665
82 A A -0.6783
83 S A -0.7219
84 S A -0.6174
85 K A -1.5482
86 P A -0.4899
87 I A 0.1285
88 S A -0.2453
89 I A -0.4737
90 N A -2.0049
91 Y A -1.9172
92 R A -3.1548
93 T A -1.9235
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Laboratory of Theory of Biopolymers 2018