| Chain sequence(s) |
A: MHSFCAFKADDGPCRARFDRWFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:18)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.0490 | |
| 2 | H | A | -0.2021 | |
| 3 | S | A | 0.2670 | |
| 4 | F | A | 0.5503 | |
| 5 | C | A | 0.0000 | |
| 6 | A | A | 0.6343 | |
| 7 | F | A | 0.2569 | |
| 8 | K | A | -1.5373 | |
| 9 | A | A | -1.8611 | |
| 10 | D | A | -2.4941 | |
| 11 | D | A | -3.0612 | |
| 12 | G | A | -2.2090 | |
| 13 | P | A | -1.5019 | |
| 14 | C | A | -1.6499 | |
| 15 | R | A | -2.3170 | |
| 16 | A | A | -1.8434 | |
| 17 | R | A | -2.3169 | |
| 18 | F | A | -1.3913 | |
| 19 | D | A | -2.4504 | |
| 20 | R | A | -2.2863 | |
| 21 | W | A | -2.0194 | |
| 22 | F | A | -1.2813 | |
| 23 | F | A | 0.0000 | |
| 24 | N | A | -0.4392 | |
| 25 | I | A | 0.8845 | |
| 26 | F | A | 1.6077 | |
| 27 | T | A | -0.1720 | |
| 28 | R | A | -1.5144 | |
| 29 | Q | A | -2.0279 | |
| 30 | C | A | -1.9425 | |
| 31 | E | A | -1.7302 | |
| 32 | E | A | -2.5219 | |
| 33 | F | A | -1.5461 | |
| 34 | I | A | -1.4760 | |
| 35 | Y | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | G | A | -1.5048 | |
| 38 | C | A | -1.5363 | |
| 39 | E | A | -2.5436 | |
| 40 | G | A | -2.5500 | |
| 41 | N | A | -1.7877 | |
| 42 | Q | A | -1.6331 | |
| 43 | N | A | 0.0000 | |
| 44 | R | A | -2.0520 | |
| 45 | F | A | 0.0000 | |
| 46 | E | A | -2.7399 | |
| 47 | S | A | -2.4951 | |
| 48 | L | A | -2.1351 | |
| 49 | E | A | -3.1751 | |
| 50 | E | A | -2.9750 | |
| 51 | C | A | 0.0000 | |
| 52 | K | A | -3.4291 | |
| 53 | K | A | -3.4005 | |
| 54 | M | A | -1.5720 | |
| 55 | C | A | 0.0000 | |
| 56 | T | A | -2.8399 | |
| 57 | R | A | -2.9588 | |
| 58 | D | A | -3.0079 |