| Chain sequence(s) |
L: KAENLYEALQD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:20)
[INFO] Main: Simulation completed successfully. (00:00:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 40 | K | L | -1.6974 | |
| 41 | A | L | -0.7351 | |
| 42 | E | L | -1.9534 | |
| 43 | N | L | -0.7979 | |
| 44 | L | L | 1.6521 | |
| 45 | Y | L | 1.3952 | |
| 46 | E | L | -0.8409 | |
| 47 | A | L | 0.1014 | |
| 48 | L | L | 1.3375 | |
| 49 | Q | L | -1.2379 | |
| 50 | D | L | -1.9994 |