Project name: query_structure

Status: done

Started: 2026-03-16 23:02:38
Settings
Chain sequence(s) A: DCGHLHDPCPNDRPGHRTCCIGLQCRYGKCLVR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-3.4459
Maximal score value
1.9758
Average score
-1.1161
Total score value
-36.8298

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.7721
2 C A -0.5022
3 G A -0.6830
4 H A -0.5464
5 L A -0.0150
6 H A -1.1645
7 D A -1.4581
8 P A -1.6881
9 C A 0.0000
10 P A -1.8707
11 N A -2.6477
12 D A -3.3954
13 R A -3.4459
14 P A -2.2136
15 G A -1.9857
16 H A -3.0226
17 R A -3.2492
18 T A -2.1065
19 C A 0.0000
20 C A 0.8822
21 I A 1.9758
22 G A 0.6689
23 L A 0.0000
24 Q A -0.7811
25 C A -1.9166
26 R A -1.8178
27 Y A -0.2402
28 G A -1.3543
29 K A -2.0384
30 C A 0.0000
31 L A -0.3440
32 V A 0.8443
33 R A -0.9419
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Laboratory of Theory of Biopolymers 2018