| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHCGEDDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAAPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPEGHPLPDDPPPSPLYVKPPPSSPYAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPLPNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9477 | |
| 2 | L | A | 1.9748 | |
| 3 | P | A | 0.6461 | |
| 4 | P | A | 0.3445 | |
| 5 | T | A | 0.1032 | |
| 6 | T | A | 0.1285 | |
| 7 | P | A | 0.1576 | |
| 8 | V | A | 1.2054 | |
| 9 | A | A | 0.0179 | |
| 10 | K | A | -1.1555 | |
| 11 | V | A | -0.4194 | |
| 12 | Q | A | -1.5267 | |
| 13 | S | A | -1.6005 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4078 | |
| 16 | E | A | -2.4316 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4648 | |
| 20 | P | A | 0.1115 | |
| 21 | T | A | 0.1156 | |
| 22 | S | A | -0.1703 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1012 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1787 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8173 | |
| 31 | R | A | -2.6414 | |
| 32 | L | A | -0.7651 | |
| 33 | L | A | 1.2254 | |
| 34 | T | A | 1.4583 | |
| 35 | V | A | 1.9867 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2270 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6219 | |
| 40 | K | A | -1.6311 | |
| 41 | D | A | -0.9167 | |
| 42 | I | A | 0.8282 | |
| 43 | V | A | 1.0153 | |
| 44 | K | A | -1.1909 | |
| 45 | N | A | -1.9284 | |
| 46 | G | A | -1.2291 | |
| 47 | K | A | -0.9416 | |
| 48 | V | A | 1.5020 | |
| 49 | V | A | 2.0621 | |
| 50 | V | A | 1.2987 | |
| 51 | P | A | 0.4927 | |
| 52 | K | A | -0.6171 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1297 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4512 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2875 | |
| 70 | K | A | -1.8063 | |
| 71 | F | A | -0.6676 | |
| 72 | A | A | -0.5756 | |
| 73 | L | A | -0.8644 | |
| 74 | P | A | -1.2629 | |
| 75 | Q | A | -2.4815 | |
| 76 | K | A | -3.0977 | |
| 77 | D | A | -2.9894 | |
| 78 | F | A | -1.6445 | |
| 79 | Y | A | -1.9174 | |
| 80 | D | A | -2.7595 | |
| 81 | P | A | -2.3483 | |
| 82 | E | A | -3.0698 | |
| 83 | K | A | -3.4363 | |
| 84 | E | A | -2.4930 | |
| 85 | R | A | -1.3087 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6520 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9620 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3060 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6748 | |
| 99 | G | A | -0.5402 | |
| 100 | P | A | -0.4415 | |
| 101 | L | A | -0.0210 | |
| 102 | G | A | -0.2810 | |
| 103 | K | A | -0.7304 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4623 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1507 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4247 | |
| 110 | L | A | 0.2744 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1017 | |
| 113 | K | A | -0.2633 | |
| 114 | L | A | -0.6823 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4110 | |
| 117 | T | A | -1.0853 | |
| 118 | E | A | -1.8420 | |
| 119 | N | A | -2.3052 | |
| 120 | P | A | -1.9172 | |
| 121 | T | A | -1.5720 | |
| 122 | E | A | -2.1668 | |
| 123 | P | A | -0.6513 | |
| 124 | V | A | -0.1201 | |
| 125 | H | A | -0.4329 | |
| 126 | C | A | -0.8266 | |
| 127 | G | A | -2.0514 | |
| 128 | E | A | -3.1309 | |
| 129 | D | A | -3.0662 | |
| 130 | D | A | -2.1808 | |
| 131 | R | A | -1.3767 | |
| 132 | V | A | 0.2110 | |
| 133 | A | A | 0.4465 | |
| 134 | F | A | 0.2834 | |
| 135 | S | A | -0.0674 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6989 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5635 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2392 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0919 | |
| 157 | D | A | 0.5392 | |
| 158 | I | A | 1.2645 | |
| 159 | A | A | 1.0152 | |
| 160 | A | A | 0.3669 | |
| 161 | P | A | 0.5977 | |
| 162 | C | A | 0.5764 | |
| 163 | P | A | 0.0453 | |
| 164 | G | A | -0.0852 | |
| 165 | L | A | 0.5820 | |
| 166 | P | A | -0.1069 | |
| 167 | P | A | -0.3372 | |
| 168 | G | A | -0.4445 | |
| 169 | A | A | -0.0143 | |
| 170 | C | A | 0.7472 | |
| 171 | P | A | 0.8166 | |
| 172 | P | A | 1.1562 | |
| 173 | I | A | 2.3096 | |
| 174 | Q | A | 1.0925 | |
| 175 | L | A | 1.4229 | |
| 176 | V | A | 0.8092 | |
| 177 | N | A | -0.3006 | |
| 178 | S | A | 0.0306 | |
| 179 | V | A | 0.4510 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3866 | |
| 182 | D | A | 0.0847 | |
| 183 | G | A | -0.1589 | |
| 184 | D | A | -0.5744 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1668 | |
| 190 | F | A | 0.0666 | |
| 191 | G | A | -0.1018 | |
| 192 | N | A | -0.2965 | |
| 193 | M | A | -0.1714 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4109 | |
| 197 | E | A | -2.6147 | |
| 198 | L | A | -1.1992 | |
| 199 | Q | A | -2.5176 | |
| 200 | Q | A | -3.3379 | |
| 201 | D | A | -3.6002 | |
| 202 | R | A | -3.3422 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1889 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3783 | |
| 211 | S | A | -1.9104 | |
| 212 | T | A | -1.4934 | |
| 213 | R | A | -2.2045 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1831 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3285 | |
| 220 | L | A | 0.5481 | |
| 221 | K | A | -1.2129 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9405 | |
| 224 | N | A | -1.6705 | |
| 225 | E | A | -1.3094 | |
| 226 | A | A | -0.6846 | |
| 227 | Y | A | -0.4539 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7037 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1316 | |
| 234 | F | A | 0.0478 | |
| 235 | G | A | -0.8759 | |
| 236 | R | A | -2.5929 | |
| 237 | R | A | -2.7610 | |
| 238 | E | A | -2.0339 | |
| 239 | Q | A | 0.0036 | |
| 240 | V | A | 1.5782 | |
| 241 | Y | A | 1.2584 | |
| 242 | A | A | 0.1404 | |
| 243 | R | A | -1.1964 | |
| 244 | H | A | -1.1013 | |
| 245 | F | A | -0.0777 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5591 | |
| 249 | C | A | -1.0139 | |
| 250 | G | A | -1.1260 | |
| 251 | P | A | -0.9395 | |
| 252 | E | A | -1.3481 | |
| 253 | G | A | -1.2883 | |
| 254 | H | A | -1.4599 | |
| 255 | P | A | -1.3058 | |
| 256 | L | A | -0.4121 | |
| 257 | P | A | -1.0062 | |
| 258 | D | A | -2.0871 | |
| 259 | D | A | -1.6036 | |
| 260 | P | A | -1.2736 | |
| 261 | P | A | -0.9178 | |
| 262 | P | A | -0.4673 | |
| 263 | S | A | -0.2453 | |
| 264 | P | A | 0.5770 | |
| 265 | L | A | 1.4683 | |
| 266 | Y | A | 1.0947 | |
| 267 | V | A | 0.9017 | |
| 268 | K | A | -1.0317 | |
| 269 | P | A | -0.3000 | |
| 270 | P | A | -0.5664 | |
| 271 | P | A | -0.3609 | |
| 272 | S | A | -0.3363 | |
| 273 | S | A | 0.0293 | |
| 274 | P | A | 0.1685 | |
| 275 | Y | A | 0.9865 | |
| 276 | A | A | 0.6669 | |
| 277 | V | A | 1.7114 | |
| 278 | R | A | 0.3706 | |
| 279 | P | A | 0.0841 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.5358 | |
| 282 | D | A | -0.9845 | |
| 283 | Y | A | 0.7932 | |
| 284 | F | A | 0.6744 | |
| 285 | G | A | 0.1784 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8552 | |
| 291 | L | A | 1.6571 | |
| 292 | V | A | 0.6292 | |
| 293 | S | A | -0.1361 | |
| 294 | S | A | -0.9636 | |
| 295 | D | A | -1.8339 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1038 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6349 | |
| 301 | R | A | -1.8683 | |
| 302 | P | A | -0.9571 | |
| 303 | F | A | -0.1821 | |
| 304 | W | A | -0.5207 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0847 | |
| 307 | R | A | -2.9242 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7827 | |
| 310 | G | A | -1.4245 | |
| 311 | N | A | -1.3868 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9192 | |
| 319 | N | A | -0.8940 | |
| 320 | E | A | -1.0567 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3675 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1803 | |
| 333 | N | A | 0.4064 | |
| 334 | F | A | 1.4604 | |
| 335 | T | A | 0.7253 | |
| 336 | I | A | 0.3364 | |
| 337 | S | A | -0.9543 | |
| 338 | Q | A | -1.6088 | |
| 339 | Q | A | -0.6989 | |
| 340 | L | A | 0.7602 | |
| 341 | S | A | 0.5830 | |
| 342 | T | A | 0.3960 | |
| 343 | P | A | 0.3459 | |
| 344 | L | A | 1.5350 | |
| 345 | P | A | 0.5675 | |
| 346 | N | A | 0.0915 | |
| 347 | V | A | 1.7172 | |
| 348 | Y | A | 1.5529 | |
| 349 | D | A | -0.1343 | |
| 350 | P | A | -0.6639 | |
| 351 | S | A | -0.5101 | |
| 352 | N | A | -0.0629 | |
| 353 | F | A | -0.7329 | |
| 354 | K | A | -1.9285 | |
| 355 | N | A | -1.7888 | |
| 356 | Y | A | -0.1737 | |
| 357 | L | A | 0.5540 | |
| 358 | R | A | 0.8970 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4653 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0063 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9112 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6799 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3083 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3231 | |
| 376 | L | A | -1.7529 | |
| 377 | D | A | -2.0211 | |
| 378 | P | A | -1.0565 | |
| 379 | G | A | -1.0156 | |
| 380 | V | A | -0.9287 | |
| 381 | L | A | -0.5370 | |
| 382 | A | A | -0.6559 | |
| 383 | H | A | -0.8452 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3936 | |
| 386 | T | A | -0.5759 | |
| 387 | M | A | -0.3331 | |
| 388 | N | A | -0.8701 | |
| 389 | P | A | -1.2677 | |
| 390 | T | A | -1.5527 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5201 | |
| 393 | E | A | -2.9247 | |
| 394 | N | A | -2.6442 | |
| 395 | W | A | -1.5030 | |
| 396 | N | A | -1.3446 | |
| 397 | L | A | -0.2236 | |
| 398 | G | A | 0.5230 | |
| 399 | F | A | 2.4203 | |
| 400 | V | A | 1.8534 | |
| 401 | P | A | 0.0610 | |
| 402 | P | A | -1.9310 | |
| 403 | K | A | -3.5706 | |
| 404 | E | A | -3.9736 | |
| 405 | R | A | -4.3651 | |
| 406 | E | A | -3.9723 | |
| 407 | D | A | -2.9545 | |
| 408 | P | A | -1.8105 | |
| 409 | Y | A | -0.9786 | |
| 410 | K | A | -2.0964 | |
| 411 | G | A | -0.6350 | |
| 412 | L | A | 0.6758 | |
| 413 | I | A | 1.5840 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4086 | |
| 416 | E | A | -1.6841 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8470 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8861 | |
| 421 | E | A | -2.4954 | |
| 422 | R | A | -2.0020 | |
| 423 | F | A | -1.0161 | |
| 424 | S | A | -1.3182 | |
| 425 | Q | A | -1.7845 | |
| 426 | D | A | -2.8948 | |
| 427 | L | A | -1.9893 | |
| 428 | D | A | -2.7772 | |
| 429 | Q | A | -2.6120 | |
| 430 | F | A | -1.4347 | |
| 431 | A | A | -0.8868 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5368 | |
| 435 | K | A | -0.6948 | |
| 436 | F | A | 0.1675 | |
| 437 | L | A | 1.0466 | |
| 438 | Y | A | 0.8397 | |
| 439 | Q | A | -0.2583 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine