| Chain sequence(s) |
B: SEELKEAIERMKRAAEIAEAWAERYPELKELLEALRKHYEAKAKEWEEKM
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:53)
[INFO] Main: Simulation completed successfully. (00:01:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.9691 | |
| 2 | E | B | -3.6000 | |
| 3 | E | B | -3.7911 | |
| 4 | L | B | -3.0861 | |
| 5 | K | B | -4.0715 | |
| 6 | E | B | -4.4667 | |
| 7 | A | B | -3.5012 | |
| 8 | I | B | 0.0000 | |
| 9 | E | B | -4.7464 | |
| 10 | R | B | -4.3687 | |
| 11 | M | B | -3.5747 | |
| 12 | K | B | -4.0618 | |
| 13 | R | B | -4.1474 | |
| 14 | A | B | -2.4998 | |
| 15 | A | B | 0.0000 | |
| 16 | E | B | -3.0670 | |
| 17 | I | B | -1.2369 | |
| 18 | A | B | 0.0000 | |
| 19 | E | B | -2.7116 | |
| 20 | A | B | -1.5392 | |
| 21 | W | B | -0.7756 | |
| 22 | A | B | 0.0000 | |
| 23 | E | B | -2.8586 | |
| 24 | R | B | -2.4715 | |
| 25 | Y | B | -1.3608 | |
| 26 | P | B | -1.8477 | |
| 27 | E | B | -2.1589 | |
| 28 | L | B | -0.8846 | |
| 29 | K | B | -2.3304 | |
| 30 | E | B | -1.7391 | |
| 31 | L | B | 0.2441 | |
| 32 | L | B | 0.0000 | |
| 33 | E | B | -1.7198 | |
| 34 | A | B | -1.0759 | |
| 35 | L | B | -0.6503 | |
| 36 | R | B | -2.5378 | |
| 37 | K | B | -2.7269 | |
| 38 | H | B | -2.2990 | |
| 39 | Y | B | -2.7340 | |
| 40 | E | B | -3.1893 | |
| 41 | A | B | -2.8757 | |
| 42 | K | B | -3.4073 | |
| 43 | A | B | 0.0000 | |
| 44 | K | B | -4.4597 | |
| 45 | E | B | -4.4526 | |
| 46 | W | B | -3.4498 | |
| 47 | E | B | -4.3236 | |
| 48 | E | B | -4.2336 | |
| 49 | K | B | -3.2678 | |
| 50 | M | B | -1.6279 |