| Chain sequence(s) |
H: EVQLLESGGGLVQPGGSLRLSCTASGFTFSNHAMSWVRRAPGKGLAWVSVTNNRGVMTHLLDSVKGRFIASRDNSKNTLYLEMRSLRADDTAVYYCSTAYSGWYDYWGRGTLVTVSS
L: EIVMTQSPVTLSVSPGERVTLSCRASQTVESSLAWYSQKAGQAPRLLIYDASTRATGVSARFSGSGFGTEFTLTISSQQSEDFEVYYCQQYNDWPWTFGQGTKVELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.8763 | |
| 2 | V | H | -0.7226 | |
| 3 | Q | H | -0.6820 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.1150 | |
| 6 | E | H | -0.3655 | |
| 7 | S | H | -0.5826 | |
| 8 | G | H | -0.7134 | |
| 9 | G | H | 0.1303 | |
| 11 | G | H | 0.8431 | |
| 12 | L | H | 1.4251 | |
| 13 | V | H | -0.0162 | |
| 14 | Q | H | -1.3184 | |
| 15 | P | H | -1.3970 | |
| 16 | G | H | -1.4548 | |
| 17 | G | H | -1.2676 | |
| 18 | S | H | -1.3769 | |
| 19 | L | H | -0.9926 | |
| 20 | R | H | -1.8269 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.5315 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -0.4113 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7610 | |
| 27 | G | H | -0.9489 | |
| 28 | F | H | -0.5571 | |
| 29 | T | H | -0.6050 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.7533 | |
| 36 | N | H | -1.8310 | |
| 37 | H | H | -1.0074 | |
| 38 | A | H | -0.7209 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | R | H | -0.5511 | |
| 45 | A | H | -0.9665 | |
| 46 | P | H | -1.0298 | |
| 47 | G | H | -1.4623 | |
| 48 | K | H | -2.2609 | |
| 49 | G | H | -1.3189 | |
| 50 | L | H | 0.0000 | |
| 51 | A | H | -0.2957 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | V | H | 0.0000 | |
| 56 | T | H | 0.0000 | |
| 57 | N | H | -0.9725 | |
| 58 | N | H | -1.7774 | |
| 59 | R | H | -1.9754 | |
| 62 | G | H | -0.4806 | |
| 63 | V | H | 1.2246 | |
| 64 | M | H | 0.6719 | |
| 65 | T | H | 0.2034 | |
| 66 | H | H | -0.5571 | |
| 67 | L | H | -0.6978 | |
| 68 | L | H | -0.8714 | |
| 69 | D | H | -2.3341 | |
| 70 | S | H | -1.5539 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.2781 | |
| 74 | G | H | -1.4984 | |
| 75 | R | H | -1.3661 | |
| 76 | F | H | 0.0000 | |
| 77 | I | H | -0.0234 | |
| 78 | A | H | 0.0000 | |
| 79 | S | H | -0.0281 | |
| 80 | R | H | -1.3450 | |
| 81 | D | H | -1.7951 | |
| 82 | N | H | -2.3086 | |
| 83 | S | H | -1.6665 | |
| 84 | K | H | -2.4450 | |
| 85 | N | H | -1.8240 | |
| 86 | T | H | 0.0000 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3975 | |
| 89 | L | H | 0.0000 | |
| 90 | E | H | -1.1365 | |
| 91 | M | H | 0.0000 | |
| 92 | R | H | -1.5637 | |
| 93 | S | H | -1.3580 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.0043 | |
| 96 | A | H | -1.5208 | |
| 97 | D | H | -2.0711 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3090 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.6615 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | S | H | 0.0000 | |
| 106 | T | H | 0.0000 | |
| 107 | A | H | 0.0000 | |
| 108 | Y | H | 0.9783 | |
| 109 | S | H | 0.2851 | |
| 113 | G | H | 0.0000 | |
| 114 | W | H | 0.0000 | |
| 115 | Y | H | 0.0000 | |
| 116 | D | H | 0.1600 | |
| 117 | Y | H | 0.3088 | |
| 118 | W | H | -0.2016 | |
| 119 | G | H | 0.0000 | |
| 120 | R | H | -1.9928 | |
| 121 | G | H | -0.7877 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.6605 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3953 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5082 | |
| 128 | S | H | -0.5984 | |
| 1 | E | L | -1.5251 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7116 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5029 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.1571 | |
| 8 | P | L | 0.4908 | |
| 9 | V | L | 1.3283 | |
| 10 | T | L | 0.3859 | |
| 11 | L | L | 0.2000 | |
| 12 | S | L | -0.3744 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -1.2187 | |
| 15 | P | L | -1.3799 | |
| 16 | G | L | -1.6332 | |
| 17 | E | L | -2.4648 | |
| 18 | R | L | -2.6599 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.4871 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.8045 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.4156 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.0631 | |
| 27 | Q | L | -1.7885 | |
| 28 | T | L | -1.2337 | |
| 29 | V | L | 0.0000 | |
| 36 | E | L | -0.9844 | |
| 37 | S | L | -0.3595 | |
| 38 | S | L | -0.5902 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | S | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.5514 | |
| 46 | A | L | -0.8503 | |
| 47 | G | L | -1.4456 | |
| 48 | Q | L | -2.1762 | |
| 49 | A | L | -1.4760 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.9032 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.3355 | |
| 56 | D | L | -0.7906 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.5408 | |
| 66 | T | L | -0.6929 | |
| 67 | R | L | -0.9519 | |
| 68 | A | L | 0.0000 | |
| 69 | T | L | -0.4566 | |
| 70 | G | L | -0.5092 | |
| 71 | V | L | -0.3587 | |
| 72 | S | L | -0.3178 | |
| 74 | A | L | -0.3347 | |
| 75 | R | L | -0.7751 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4956 | |
| 78 | G | L | -0.5558 | |
| 79 | S | L | -0.4159 | |
| 80 | G | L | -0.4581 | |
| 83 | F | L | 0.5923 | |
| 84 | G | L | 0.0000 | |
| 85 | T | L | -1.6493 | |
| 86 | E | L | -2.4223 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6655 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6041 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4652 | |
| 93 | S | L | -1.6450 | |
| 94 | Q | L | 0.0000 | |
| 95 | Q | L | -1.3731 | |
| 96 | S | L | -0.8456 | |
| 97 | E | L | -1.4271 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.3172 | |
| 100 | E | L | 0.0000 | |
| 101 | V | L | -0.1506 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | -0.4128 | |
| 108 | N | L | -1.1566 | |
| 109 | D | L | -0.8013 | |
| 114 | W | L | 0.1056 | |
| 115 | P | L | -0.3830 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | 0.0276 | |
| 118 | F | L | 0.2938 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -0.5729 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.6173 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.2266 | |
| 126 | L | L | 0.4385 | |
| 127 | K | L | -1.2156 |