Project name: clone58

Status: done

Started: 2026-07-28 07:01:11
Settings
Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCTASGFTFSNHAMSWVRRAPGKGLAWVSVTNNRGVMTHLLDSVKGRFIASRDNSKNTLYLEMRSLRADDTAVYYCSTAYSGWYDYWGRGTLVTVSS
L: EIVMTQSPVTLSVSPGERVTLSCRASQTVESSLAWYSQKAGQAPRLLIYDASTRATGVSARFSGSGFGTEFTLTISSQQSEDFEVYYCQQYNDWPWTFGQGTKVELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:13)
Show buried residues

Minimal score value
-2.6599
Maximal score value
1.6605
Average score
-0.5188
Total score value
-116.2018

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.8763
2 V H -0.7226
3 Q H -0.6820
4 L H 0.0000
5 L H 0.1150
6 E H -0.3655
7 S H -0.5826
8 G H -0.7134
9 G H 0.1303
11 G H 0.8431
12 L H 1.4251
13 V H -0.0162
14 Q H -1.3184
15 P H -1.3970
16 G H -1.4548
17 G H -1.2676
18 S H -1.3769
19 L H -0.9926
20 R H -1.8269
21 L H 0.0000
22 S H -0.5315
23 C H 0.0000
24 T H -0.4113
25 A H 0.0000
26 S H -0.7610
27 G H -0.9489
28 F H -0.5571
29 T H -0.6050
30 F H 0.0000
35 S H -1.7533
36 N H -1.8310
37 H H -1.0074
38 A H -0.7209
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 R H -0.5511
45 A H -0.9665
46 P H -1.0298
47 G H -1.4623
48 K H -2.2609
49 G H -1.3189
50 L H 0.0000
51 A H -0.2957
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 V H 0.0000
56 T H 0.0000
57 N H -0.9725
58 N H -1.7774
59 R H -1.9754
62 G H -0.4806
63 V H 1.2246
64 M H 0.6719
65 T H 0.2034
66 H H -0.5571
67 L H -0.6978
68 L H -0.8714
69 D H -2.3341
70 S H -1.5539
71 V H 0.0000
72 K H -2.2781
74 G H -1.4984
75 R H -1.3661
76 F H 0.0000
77 I H -0.0234
78 A H 0.0000
79 S H -0.0281
80 R H -1.3450
81 D H -1.7951
82 N H -2.3086
83 S H -1.6665
84 K H -2.4450
85 N H -1.8240
86 T H 0.0000
87 L H 0.0000
88 Y H -0.3975
89 L H 0.0000
90 E H -1.1365
91 M H 0.0000
92 R H -1.5637
93 S H -1.3580
94 L H 0.0000
95 R H -2.0043
96 A H -1.5208
97 D H -2.0711
98 D H 0.0000
99 T H -0.3090
100 A H 0.0000
101 V H 0.6615
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 S H 0.0000
106 T H 0.0000
107 A H 0.0000
108 Y H 0.9783
109 S H 0.2851
113 G H 0.0000
114 W H 0.0000
115 Y H 0.0000
116 D H 0.1600
117 Y H 0.3088
118 W H -0.2016
119 G H 0.0000
120 R H -1.9928
121 G H -0.7877
122 T H 0.0000
123 L H 1.6605
124 V H 0.0000
125 T H 0.3953
126 V H 0.0000
127 S H -0.5082
128 S H -0.5984
1 E L -1.5251
2 I L 0.0000
3 V L 0.7116
4 M L 0.0000
5 T L -0.5029
6 Q L 0.0000
7 S L -0.1571
8 P L 0.4908
9 V L 1.3283
10 T L 0.3859
11 L L 0.2000
12 S L -0.3744
13 V L 0.0000
14 S L -1.2187
15 P L -1.3799
16 G L -1.6332
17 E L -2.4648
18 R L -2.6599
19 V L 0.0000
20 T L -0.4871
21 L L 0.0000
22 S L -0.8045
23 C L 0.0000
24 R L -2.4156
25 A L 0.0000
26 S L -1.0631
27 Q L -1.7885
28 T L -1.2337
29 V L 0.0000
36 E L -0.9844
37 S L -0.3595
38 S L -0.5902
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 S L 0.0000
44 Q L 0.0000
45 K L -1.5514
46 A L -0.8503
47 G L -1.4456
48 Q L -2.1762
49 A L -1.4760
50 P L 0.0000
51 R L -0.9032
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.3355
56 D L -0.7906
57 A L 0.0000
65 S L -0.5408
66 T L -0.6929
67 R L -0.9519
68 A L 0.0000
69 T L -0.4566
70 G L -0.5092
71 V L -0.3587
72 S L -0.3178
74 A L -0.3347
75 R L -0.7751
76 F L 0.0000
77 S L -0.4956
78 G L -0.5558
79 S L -0.4159
80 G L -0.4581
83 F L 0.5923
84 G L 0.0000
85 T L -1.6493
86 E L -2.4223
87 F L 0.0000
88 T L -0.6655
89 L L 0.0000
90 T L -0.6041
91 I L 0.0000
92 S L -1.4652
93 S L -1.6450
94 Q L 0.0000
95 Q L -1.3731
96 S L -0.8456
97 E L -1.4271
98 D L 0.0000
99 F L -0.3172
100 E L 0.0000
101 V L -0.1506
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L -0.4128
108 N L -1.1566
109 D L -0.8013
114 W L 0.1056
115 P L -0.3830
116 W L 0.0000
117 T L 0.0276
118 F L 0.2938
119 G L 0.0000
120 Q L -0.5729
121 G L 0.0000
122 T L 0.0000
123 K L -0.6173
124 V L 0.0000
125 E L -0.2266
126 L L 0.4385
127 K L -1.2156
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Laboratory of Theory of Biopolymers 2018