| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIVVDGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTTPQHETADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGHPLPDAPPPSPLYVKPPPGSPFAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPADNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9489 | |
| 2 | L | A | 1.9735 | |
| 3 | P | A | 0.6506 | |
| 4 | P | A | 0.3443 | |
| 5 | T | A | 0.1048 | |
| 6 | T | A | 0.1240 | |
| 7 | P | A | 0.1587 | |
| 8 | V | A | 1.2192 | |
| 9 | A | A | 0.0244 | |
| 10 | K | A | -1.1529 | |
| 11 | V | A | -0.3988 | |
| 12 | Q | A | -1.5409 | |
| 13 | S | A | -1.6154 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4463 | |
| 16 | E | A | -2.4566 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4548 | |
| 20 | P | A | 0.1260 | |
| 21 | T | A | 0.1630 | |
| 22 | S | A | -0.0959 | |
| 23 | L | A | 0.1007 | |
| 24 | F | A | -0.0124 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1721 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7640 | |
| 31 | R | A | -2.6237 | |
| 32 | L | A | -0.7601 | |
| 33 | L | A | 1.2189 | |
| 34 | T | A | 1.4524 | |
| 35 | V | A | 1.9946 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7264 | |
| 40 | R | A | -1.9565 | |
| 41 | D | A | -0.7686 | |
| 42 | I | A | 1.2335 | |
| 43 | V | A | 2.0997 | |
| 44 | V | A | 1.4680 | |
| 45 | D | A | -1.0075 | |
| 46 | G | A | -0.5990 | |
| 47 | K | A | -0.2686 | |
| 48 | V | A | 2.1287 | |
| 49 | L | A | 2.4752 | |
| 50 | V | A | 1.4813 | |
| 51 | P | A | 0.3573 | |
| 52 | K | A | -0.6813 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.0959 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4513 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2873 | |
| 70 | K | A | -1.8042 | |
| 71 | F | A | -0.6619 | |
| 72 | A | A | -0.5874 | |
| 73 | L | A | -0.8627 | |
| 74 | P | A | -1.2558 | |
| 75 | Q | A | -2.4782 | |
| 76 | K | A | -3.0884 | |
| 77 | D | A | -2.9743 | |
| 78 | F | A | -1.6273 | |
| 79 | Y | A | -1.8873 | |
| 80 | D | A | -2.7286 | |
| 81 | P | A | -2.3433 | |
| 82 | E | A | -3.0638 | |
| 83 | K | A | -3.4322 | |
| 84 | E | A | -2.4931 | |
| 85 | R | A | -1.3027 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6140 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9845 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3284 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6755 | |
| 99 | G | A | -0.5310 | |
| 100 | P | A | -0.4172 | |
| 101 | L | A | 0.0027 | |
| 102 | G | A | -0.2804 | |
| 103 | K | A | -0.7625 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4665 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0952 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4064 | |
| 110 | L | A | 0.3827 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9889 | |
| 113 | K | A | -0.4485 | |
| 114 | L | A | -1.1729 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3595 | |
| 117 | T | A | -1.2451 | |
| 118 | E | A | -2.6264 | |
| 119 | N | A | -2.3643 | |
| 120 | P | A | -1.6823 | |
| 121 | T | A | -1.0124 | |
| 122 | T | A | -0.8088 | |
| 123 | P | A | -0.8746 | |
| 124 | Q | A | -1.5412 | |
| 125 | H | A | -1.9147 | |
| 126 | E | A | -2.7216 | |
| 127 | T | A | -1.8357 | |
| 128 | A | A | -1.3905 | |
| 129 | D | A | -2.0923 | |
| 130 | V | A | -1.4618 | |
| 131 | R | A | -0.7463 | |
| 132 | V | A | 0.4002 | |
| 133 | A | A | 0.4456 | |
| 134 | F | A | 0.2831 | |
| 135 | S | A | -0.0899 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7051 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5586 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2584 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0837 | |
| 157 | D | A | 0.3353 | |
| 158 | I | A | 0.8350 | |
| 159 | A | A | 0.1003 | |
| 160 | E | A | -1.4841 | |
| 161 | P | A | -0.2532 | |
| 162 | C | A | 0.1708 | |
| 163 | P | A | -0.1765 | |
| 164 | G | A | -0.0768 | |
| 165 | L | A | 0.5851 | |
| 166 | P | A | -0.1107 | |
| 167 | P | A | -0.3394 | |
| 168 | G | A | -0.4158 | |
| 169 | A | A | -0.0120 | |
| 170 | C | A | 0.7588 | |
| 171 | P | A | 0.5534 | |
| 172 | P | A | 0.7782 | |
| 173 | I | A | 2.0205 | |
| 174 | Q | A | 0.8074 | |
| 175 | L | A | 1.3954 | |
| 176 | V | A | 0.7928 | |
| 177 | N | A | -0.3344 | |
| 178 | S | A | 0.0072 | |
| 179 | V | A | 0.4110 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3730 | |
| 182 | D | A | 0.0829 | |
| 183 | G | A | -0.1610 | |
| 184 | D | A | -0.5834 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4854 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1082 | |
| 190 | F | A | 0.0132 | |
| 191 | G | A | -0.1609 | |
| 192 | N | A | -0.3467 | |
| 193 | M | A | -0.1859 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3995 | |
| 197 | E | A | -2.5945 | |
| 198 | L | A | -1.1976 | |
| 199 | Q | A | -2.5252 | |
| 200 | Q | A | -3.3379 | |
| 201 | D | A | -3.5991 | |
| 202 | R | A | -3.3672 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | -0.0106 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4438 | |
| 211 | S | A | -1.9446 | |
| 212 | T | A | -1.4848 | |
| 213 | R | A | -2.1713 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2224 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2931 | |
| 220 | L | A | 0.4897 | |
| 221 | K | A | -1.3305 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9637 | |
| 224 | N | A | -1.6994 | |
| 225 | E | A | -1.3317 | |
| 226 | A | A | -0.6763 | |
| 227 | Y | A | -0.4490 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7126 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.0946 | |
| 234 | F | A | 0.0998 | |
| 235 | G | A | -0.8678 | |
| 236 | R | A | -2.6265 | |
| 237 | R | A | -2.8752 | |
| 238 | E | A | -2.1597 | |
| 239 | Q | A | -0.1176 | |
| 240 | V | A | 1.6007 | |
| 241 | Y | A | 1.2853 | |
| 242 | A | A | 0.1774 | |
| 243 | R | A | -1.3299 | |
| 244 | H | A | -1.1482 | |
| 245 | F | A | -0.1675 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.2772 | |
| 248 | R | A | -0.6506 | |
| 249 | A | A | -1.2972 | |
| 250 | G | A | -1.1337 | |
| 251 | P | A | -1.1946 | |
| 252 | D | A | -1.5526 | |
| 253 | G | A | -1.3161 | |
| 254 | H | A | -1.4874 | |
| 255 | P | A | -1.4359 | |
| 256 | L | A | -0.5040 | |
| 257 | P | A | -0.9150 | |
| 258 | D | A | -1.7985 | |
| 259 | A | A | -0.7811 | |
| 260 | P | A | -0.9719 | |
| 261 | P | A | -0.6890 | |
| 262 | P | A | -0.1662 | |
| 263 | S | A | -0.0161 | |
| 264 | P | A | 0.6704 | |
| 265 | L | A | 1.5433 | |
| 266 | Y | A | 1.1270 | |
| 267 | V | A | 0.9525 | |
| 268 | K | A | -0.8350 | |
| 269 | P | A | -0.1295 | |
| 270 | P | A | -0.4756 | |
| 271 | P | A | -0.6397 | |
| 272 | G | A | -0.2161 | |
| 273 | S | A | 0.2726 | |
| 274 | P | A | 0.7580 | |
| 275 | F | A | 1.7509 | |
| 276 | A | A | 0.9396 | |
| 277 | V | A | 1.6309 | |
| 278 | R | A | 0.1161 | |
| 279 | P | A | -0.6777 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.7209 | |
| 282 | D | A | -0.9799 | |
| 283 | Y | A | 0.8446 | |
| 284 | F | A | 0.6692 | |
| 285 | G | A | 0.1135 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9510 | |
| 291 | L | A | 1.6176 | |
| 292 | V | A | 0.5839 | |
| 293 | S | A | -0.1845 | |
| 294 | S | A | -1.0004 | |
| 295 | D | A | -1.8788 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0423 | |
| 298 | L | A | -1.1730 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6732 | |
| 301 | R | A | -1.9481 | |
| 302 | P | A | -0.9892 | |
| 303 | F | A | -0.1890 | |
| 304 | W | A | -0.5152 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0751 | |
| 307 | R | A | -2.9069 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7098 | |
| 310 | G | A | -1.3870 | |
| 311 | N | A | -1.3806 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9037 | |
| 319 | N | A | -0.8749 | |
| 320 | E | A | -1.0414 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3652 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1821 | |
| 333 | N | A | 0.4149 | |
| 334 | F | A | 1.4400 | |
| 335 | T | A | 0.7129 | |
| 336 | I | A | 0.3303 | |
| 337 | S | A | -1.1096 | |
| 338 | Q | A | -1.9395 | |
| 339 | Q | A | -1.6677 | |
| 340 | L | A | 0.2050 | |
| 341 | S | A | -0.0653 | |
| 342 | T | A | -0.5529 | |
| 343 | P | A | -0.5846 | |
| 344 | A | A | -0.8994 | |
| 345 | D | A | -1.6526 | |
| 346 | N | A | -1.0816 | |
| 347 | V | A | 0.9718 | |
| 348 | Y | A | 1.1045 | |
| 349 | D | A | -0.1188 | |
| 350 | P | A | -0.7573 | |
| 351 | S | A | -0.6232 | |
| 352 | N | A | -0.7211 | |
| 353 | F | A | -1.1977 | |
| 354 | K | A | -2.0763 | |
| 355 | N | A | -1.8602 | |
| 356 | Y | A | -0.1616 | |
| 357 | L | A | 0.5702 | |
| 358 | R | A | 0.9184 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4748 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0139 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9340 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6786 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3019 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3184 | |
| 376 | L | A | -1.7412 | |
| 377 | D | A | -2.0186 | |
| 378 | P | A | -1.0556 | |
| 379 | G | A | -1.0158 | |
| 380 | V | A | -0.9280 | |
| 381 | L | A | -0.5392 | |
| 382 | A | A | -0.6574 | |
| 383 | H | A | -0.8446 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3955 | |
| 386 | T | A | -0.5715 | |
| 387 | M | A | -0.3267 | |
| 388 | N | A | -0.8651 | |
| 389 | P | A | -1.2755 | |
| 390 | T | A | -1.5209 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4994 | |
| 393 | E | A | -2.8775 | |
| 394 | N | A | -2.6325 | |
| 395 | W | A | -1.4566 | |
| 396 | N | A | -1.2119 | |
| 397 | L | A | -0.1506 | |
| 398 | G | A | 0.5926 | |
| 399 | F | A | 2.4539 | |
| 400 | V | A | 1.8850 | |
| 401 | P | A | 0.0881 | |
| 402 | P | A | -1.8130 | |
| 403 | K | A | -3.4814 | |
| 404 | E | A | -3.8164 | |
| 405 | R | A | -4.0595 | |
| 406 | E | A | -3.8006 | |
| 407 | D | A | -2.8250 | |
| 408 | P | A | -1.7381 | |
| 409 | Y | A | -0.9650 | |
| 410 | K | A | -2.0940 | |
| 411 | G | A | -0.6112 | |
| 412 | L | A | 0.6878 | |
| 413 | I | A | 1.5966 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3769 | |
| 416 | E | A | -1.6245 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8280 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8772 | |
| 421 | E | A | -2.4927 | |
| 422 | R | A | -2.0618 | |
| 423 | F | A | -1.0098 | |
| 424 | S | A | -1.3024 | |
| 425 | Q | A | -1.7972 | |
| 426 | D | A | -2.8681 | |
| 427 | L | A | -1.9565 | |
| 428 | D | A | -2.7332 | |
| 429 | Q | A | -2.5858 | |
| 430 | F | A | -1.4098 | |
| 431 | A | A | -0.8629 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.4900 | |
| 435 | K | A | -0.6712 | |
| 436 | F | A | 0.1937 | |
| 437 | L | A | 1.0662 | |
| 438 | Y | A | 0.8541 | |
| 439 | Q | A | -0.2528 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine