Project name: 3-g4s-5r1

Status: done

Started: 2025-03-06 08:20:53
Settings
Chain sequence(s) A: FSRPGLPVEYLQVPSPSMGRDIKVQFQSGGNNSPAVYLLDGLRAQDDYNGWDINTPAFEWYYQSGLSIVMPVGGQSSFYSDWYSPACGKAGCQTYKWETFLTSELPQWLSANRAVKPTGSAAIGLSMAGSSAMILAAYHPQQFIYAGSLSALLDPSQGMGPSLIGLAMGDAGGYKAADMWGPSSDPAWERNDPTQQIPKLVANNTRLWVYCGNGTPNELGGANIPAEFLENFVRSSNLKFQDAYNAAGGHNAVFNFPPNGTHSWEYWGAQLNAMKGDLQSSLGAGGGGGSFAVTNDGVI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:12)
Show buried residues

Minimal score value
-2.9133
Maximal score value
2.5525
Average score
-0.4566
Total score value
-136.521

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 1.4400
2 S A -0.1693
3 R A -1.6216
4 P A -1.0943
5 G A -1.0065
6 L A -0.6808
7 P A -0.3356
8 V A -0.1398
9 E A -0.1919
10 Y A 0.6359
11 L A 0.0000
12 Q A -1.8603
13 V A 0.0000
14 P A -1.6148
15 S A 0.0000
16 P A -0.9829
17 S A -0.7043
18 M A 0.0000
19 G A -1.3225
20 R A -1.9619
21 D A -2.7197
22 I A 0.0000
23 K A -1.6529
24 V A 0.0000
25 Q A 0.0000
26 F A 0.0000
27 Q A 0.0000
28 S A -0.9071
29 G A -1.0695
30 G A -1.6685
31 N A -2.2334
32 N A -2.2348
33 S A 0.0000
34 P A 0.0000
35 A A 0.0000
36 V A 0.0000
37 Y A 0.0000
38 L A 0.0000
39 L A 0.0000
40 D A 0.0000
41 G A 0.0000
42 L A -1.0664
43 R A -2.4587
44 A A 0.0000
45 Q A -2.3828
46 D A -2.9133
47 D A -1.9525
48 Y A -0.3778
49 N A 0.0000
50 G A 0.0000
51 W A 0.0000
52 D A 0.0000
53 I A 0.9381
54 N A -0.0099
55 T A 0.0000
56 P A -0.2350
57 A A 0.0000
58 F A 0.0000
59 E A -0.8089
60 W A -0.4177
61 Y A 0.0000
62 Y A -0.1929
63 Q A -1.2328
64 S A 0.0000
65 G A -1.3016
66 L A 0.0000
67 S A 0.0000
68 I A 0.0000
69 V A 0.0000
70 M A 0.0000
71 P A 0.0000
72 V A 0.0000
73 G A 0.0000
74 G A 0.0000
75 Q A -1.3507
76 S A 0.0000
77 S A 0.0000
78 F A 0.0000
79 Y A 0.0000
80 S A 0.0000
81 D A -0.6450
82 W A 0.0000
83 Y A 0.9609
84 S A 0.1297
85 P A -0.2414
86 A A 0.0000
87 C A -0.4887
88 G A -1.5002
89 K A -1.9788
90 A A -0.8200
91 G A -0.4733
92 C A 0.1987
93 Q A -0.2978
94 T A -0.3524
95 Y A 0.0000
96 K A -0.8708
97 W A 0.0000
98 E A -0.6027
99 T A -0.5243
100 F A 0.0000
101 L A 0.0000
102 T A -0.3452
103 S A -0.5050
104 E A -0.6651
105 L A 0.0000
106 P A 0.0000
107 Q A -1.4448
108 W A -0.8466
109 L A 0.0000
110 S A -1.3335
111 A A -0.8779
112 N A -1.2967
113 R A -1.6524
114 A A -1.6561
115 V A 0.0000
116 K A -1.3819
117 P A -0.9451
118 T A -0.6652
119 G A -0.3662
120 S A 0.0000
121 A A 0.0000
122 A A 0.0000
123 I A 0.0000
124 G A 0.0000
125 L A 0.0000
126 S A -0.1096
127 M A 0.0000
128 A A 0.0000
129 G A 0.0000
130 S A 0.0000
131 S A 0.0000
132 A A 0.0000
133 M A 0.0000
134 I A 0.0000
135 L A 0.0000
136 A A 0.0000
137 A A 0.0000
138 Y A -0.2490
139 H A -0.4290
140 P A -0.8776
141 Q A -1.2073
142 Q A 0.0000
143 F A 0.0000
144 I A -0.0986
145 Y A 0.0000
146 A A 0.0000
147 G A 0.0000
148 S A 0.0000
149 L A 0.0000
150 S A 0.0000
151 A A 0.0000
152 L A 0.1527
153 L A 0.0000
154 D A -1.2408
155 P A 0.0000
156 S A -1.5386
157 Q A -1.5724
158 G A -0.5467
159 M A 0.4709
160 G A 0.0000
161 P A -0.0292
162 S A 0.3788
163 L A 0.8714
164 I A 0.0000
165 G A -0.0820
166 L A 0.6769
167 A A -0.3619
168 M A 0.0000
169 G A -1.4544
170 D A -2.2005
171 A A 0.0000
172 G A -1.8758
173 G A -1.8376
174 Y A 0.0000
175 K A -1.9083
176 A A -0.8684
177 A A -0.6535
178 D A -0.4600
179 M A 0.0000
180 W A 0.0000
181 G A 0.0000
182 P A -0.6226
183 S A -0.9611
184 S A -0.8977
185 D A -1.1379
186 P A -1.2862
187 A A -0.9628
188 W A 0.0000
189 E A -2.7745
190 R A -1.7399
191 N A 0.0000
192 D A 0.0000
193 P A 0.0000
194 T A -1.5574
195 Q A -2.0317
196 Q A 0.0000
197 I A 0.0000
198 P A -1.0414
199 K A -1.2995
200 L A 0.0000
201 V A -1.2467
202 A A -0.9345
203 N A -1.4890
204 N A -1.7351
205 T A 0.0000
206 R A -0.6573
207 L A 0.0000
208 W A 0.0000
209 V A 0.0000
210 Y A 0.0000
211 C A 0.0000
212 G A 0.0000
213 N A -0.7699
214 G A 0.0000
215 T A -0.5361
216 P A -1.0624
217 N A -1.3153
218 E A -1.7772
219 L A -0.6617
220 G A -0.9022
221 G A -0.6933
222 A A -0.4873
223 N A -0.0365
224 I A 1.7814
225 P A 0.9982
226 A A 0.0000
227 E A 0.4257
228 F A 1.8004
229 L A 1.1021
230 E A 0.0000
231 N A -0.7117
232 F A 0.2033
233 V A 0.0000
234 R A -0.6490
235 S A -0.7429
236 S A 0.0000
237 N A 0.0000
238 L A -0.6871
239 K A -2.1814
240 F A 0.0000
241 Q A -1.7382
242 D A -2.7285
243 A A -1.9167
244 Y A 0.0000
245 N A -2.4687
246 A A -1.3518
247 A A -0.9982
248 G A -1.1358
249 G A -1.7665
250 H A -1.6897
251 N A -1.2748
252 A A -0.5635
253 V A 0.2219
254 F A 0.4549
255 N A 0.0784
256 F A 0.1772
257 P A -0.2614
258 P A -0.5758
259 N A -0.8241
260 G A 0.0000
261 T A 0.0000
262 H A -0.3876
263 S A -0.5131
264 W A -0.4027
265 E A -1.0729
266 Y A 0.0000
267 W A 0.0000
268 G A 0.0000
269 A A -0.4734
270 Q A -0.5959
271 L A 0.0000
272 N A -0.9604
273 A A -0.6595
274 M A 0.0000
275 K A -1.0914
276 G A -1.1826
277 D A -0.9733
278 L A 0.0000
279 Q A -1.0739
280 S A -0.9500
281 S A -0.6181
282 L A 0.0000
283 G A -0.9259
284 A A 0.0000
285 G A -1.2401
286 G A -1.2093
287 G A -1.4378
288 G A -1.1165
289 G A -0.3342
290 S A 0.6188
291 F A 2.1782
292 A A 1.5360
293 V A 1.6793
294 T A -0.1500
295 N A -1.5120
296 D A -1.8332
297 G A -0.3022
298 V A 1.9674
299 I A 2.5525
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Laboratory of Theory of Biopolymers 2018