| Chain sequence(s) |
A: QGGSKLLAVVAQEGSSNRAK
B: VLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQ input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.6274 | |
| 2 | G | A | -1.7831 | |
| 3 | G | A | -1.5577 | |
| 4 | S | A | -0.8138 | |
| 5 | K | A | -0.8607 | |
| 6 | L | A | 1.4504 | |
| 7 | L | A | 1.2090 | |
| 8 | A | A | 1.5693 | |
| 9 | V | A | 1.6258 | |
| 10 | V | A | 2.2124 | |
| 11 | A | A | 0.6193 | |
| 12 | Q | A | -1.3630 | |
| 13 | E | A | -1.9869 | |
| 14 | G | A | -1.7551 | |
| 15 | S | A | -1.6081 | |
| 16 | S | A | -1.8929 | |
| 17 | N | A | -2.2115 | |
| 18 | R | A | -1.9420 | |
| 19 | A | A | -0.7726 | |
| 20 | K | A | -0.3818 | |
| 37 | V | B | 2.6640 | |
| 38 | L | B | 2.7004 | |
| 39 | Y | B | 1.9584 | |
| 40 | V | B | 1.5616 | |
| 41 | G | B | -0.8863 | |
| 42 | S | B | -1.3189 | |
| 43 | K | B | -2.4020 | |
| 44 | T | B | -2.1218 | |
| 45 | K | B | -2.0622 | |
| 46 | E | B | -2.3762 | |
| 47 | G | B | -1.7731 | |
| 48 | V | B | -0.7100 | |
| 49 | V | B | -0.0107 | |
| 50 | H | B | -0.6049 | |
| 51 | G | B | -0.1827 | |
| 52 | V | B | 0.7720 | |
| 53 | A | B | 0.8168 | |
| 54 | T | B | 1.2336 | |
| 55 | V | B | 1.3444 | |
| 56 | A | B | -0.0645 | |
| 57 | E | B | -1.9626 | |
| 58 | K | B | -1.7303 | |
| 59 | T | B | -1.7924 | |
| 60 | K | B | -2.3613 | |
| 61 | E | B | -2.3188 | |
| 62 | Q | B | -1.8450 | |
| 63 | V | B | 0.0558 | |
| 64 | T | B | -0.3670 | |
| 65 | N | B | -0.4197 | |
| 66 | V | B | 0.7808 | |
| 67 | G | B | -0.1408 | |
| 68 | G | B | -0.3383 | |
| 69 | A | B | 0.6856 | |
| 70 | V | B | 1.9192 | |
| 71 | V | B | 2.6530 | |
| 72 | T | B | 1.4845 | |
| 73 | G | B | 0.7783 | |
| 74 | V | B | 1.5236 | |
| 75 | T | B | 0.9662 | |
| 76 | A | B | 1.0973 | |
| 77 | V | B | 1.0799 | |
| 78 | A | B | -0.2263 | |
| 79 | Q | B | -1.5903 | |
| 80 | K | B | -1.9384 | |
| 81 | T | B | -0.8143 | |
| 82 | V | B | 0.2776 | |
| 83 | E | B | -1.2171 | |
| 84 | G | B | -1.0182 | |
| 85 | A | B | -0.5048 | |
| 86 | G | B | -0.5690 | |
| 87 | S | B | 0.0611 | |
| 88 | I | B | 1.1360 | |
| 89 | A | B | 1.0634 | |
| 90 | A | B | 0.4609 | |
| 91 | A | B | 0.6642 | |
| 92 | T | B | 0.6813 | |
| 93 | G | B | 0.8179 | |
| 94 | F | B | 2.1788 | |
| 95 | V | B | 1.4125 | |
| 96 | K | B | -1.6378 | |
| 97 | K | B | -3.2818 | |
| 98 | D | B | -3.5888 | |
| 99 | Q | B | -2.4360 |