Project name: csgb-asyn (cluster1)

Status: done

Started: 2026-03-24 11:17:14
Settings
Chain sequence(s) A: QGGSKLLAVVAQEGSSNRAK
B: VLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQ
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:57)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:58)
Show buried residues

Minimal score value
-3.5888
Maximal score value
2.7004
Average score
-0.285
Total score value
-23.6536

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.6274
2 G A -1.7831
3 G A -1.5577
4 S A -0.8138
5 K A -0.8607
6 L A 1.4504
7 L A 1.2090
8 A A 1.5693
9 V A 1.6258
10 V A 2.2124
11 A A 0.6193
12 Q A -1.3630
13 E A -1.9869
14 G A -1.7551
15 S A -1.6081
16 S A -1.8929
17 N A -2.2115
18 R A -1.9420
19 A A -0.7726
20 K A -0.3818
37 V B 2.6640
38 L B 2.7004
39 Y B 1.9584
40 V B 1.5616
41 G B -0.8863
42 S B -1.3189
43 K B -2.4020
44 T B -2.1218
45 K B -2.0622
46 E B -2.3762
47 G B -1.7731
48 V B -0.7100
49 V B -0.0107
50 H B -0.6049
51 G B -0.1827
52 V B 0.7720
53 A B 0.8168
54 T B 1.2336
55 V B 1.3444
56 A B -0.0645
57 E B -1.9626
58 K B -1.7303
59 T B -1.7924
60 K B -2.3613
61 E B -2.3188
62 Q B -1.8450
63 V B 0.0558
64 T B -0.3670
65 N B -0.4197
66 V B 0.7808
67 G B -0.1408
68 G B -0.3383
69 A B 0.6856
70 V B 1.9192
71 V B 2.6530
72 T B 1.4845
73 G B 0.7783
74 V B 1.5236
75 T B 0.9662
76 A B 1.0973
77 V B 1.0799
78 A B -0.2263
79 Q B -1.5903
80 K B -1.9384
81 T B -0.8143
82 V B 0.2776
83 E B -1.2171
84 G B -1.0182
85 A B -0.5048
86 G B -0.5690
87 S B 0.0611
88 I B 1.1360
89 A B 1.0634
90 A B 0.4609
91 A B 0.6642
92 T B 0.6813
93 G B 0.8179
94 F B 2.1788
95 V B 1.4125
96 K B -1.6378
97 K B -3.2818
98 D B -3.5888
99 Q B -2.4360
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Laboratory of Theory of Biopolymers 2018