Project name: b907f76736e4f18

Status: done

Started: 2024-07-24 02:35:13
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Chain sequence(s) A: MNHKVHRYFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFRFFSMARDLLSWMESIIRQIETQE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:16)
Show buried residues

Minimal score value
-4.1134
Maximal score value
1.0488
Average score
-1.2634
Total score value
-171.8156

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.4835
2 N A -2.2351
3 H A -2.8294
4 K A -2.7492
5 V A 0.0000
6 H A -2.4037
7 R A -2.6561
8 Y A 0.0000
9 F A -0.2857
10 Y A 0.0518
11 T A 0.0000
12 G A 0.0000
13 A A -0.5486
14 E A -1.2622
15 I A 0.0000
16 L A -0.9883
17 G A -1.3763
18 L A -1.1123
19 I A 0.0000
20 D A -3.0307
21 E A -3.5751
22 K A -3.0746
23 H A -2.9534
24 R A -4.1134
25 E A -3.7956
26 L A -2.4436
27 P A -1.9881
28 E A -3.0662
29 D A -2.1596
30 V A -1.3066
31 G A -0.3320
32 L A 0.9070
33 D A -0.9468
34 A A -1.0526
35 S A -0.8064
36 T A -0.6443
37 A A 0.0000
38 E A -1.4020
39 S A -0.7847
40 F A -0.3629
41 H A -1.0014
42 R A -1.3614
43 V A 0.6384
44 H A 0.0000
45 T A -1.4227
46 A A -1.2235
47 F A -1.8393
48 E A -2.7686
49 R A -3.3392
50 E A -2.9962
51 L A 0.0000
52 H A -1.4445
53 L A 0.3136
54 L A 0.0000
55 G A -0.0953
56 V A 0.9448
57 Q A -0.3202
58 V A 0.0000
59 Q A -1.3210
60 Q A -1.6132
61 F A 0.0000
62 Q A -1.6884
63 D A -1.8618
64 V A -1.4170
65 A A 0.0000
66 T A -1.5404
67 R A -2.0730
68 L A 0.0000
69 Q A -1.5653
70 T A -0.8080
71 A A -0.3915
72 Y A -0.8219
73 A A -1.0218
74 G A -1.8775
75 E A -2.9516
76 K A -2.4116
77 A A -2.2953
78 E A -3.4140
79 A A -2.4762
80 I A 0.0000
81 Q A -3.0201
82 N A -3.2447
83 K A -2.4119
84 E A -2.4492
85 Q A -2.9313
86 E A -2.9616
87 V A 0.0000
88 S A -1.6667
89 A A -1.2237
90 A A -1.2541
91 W A -0.9634
92 Q A -1.2352
93 A A -0.9378
94 L A 0.0000
95 L A -0.9041
96 D A -1.9620
97 A A -1.1476
98 C A 0.0000
99 A A -1.3979
100 G A -1.3843
101 R A 0.0000
102 R A -2.2120
103 T A -1.5390
104 Q A -2.5145
105 L A 0.0000
106 V A -1.4153
107 D A -3.0305
108 T A -2.1094
109 A A -2.0618
110 D A -3.1305
111 K A -2.3462
112 F A -1.1867
113 R A -1.9630
114 F A 0.2712
115 F A -0.0695
116 S A -0.7098
117 M A 0.3372
118 A A 0.1840
119 R A -1.3492
120 D A -1.1001
121 L A 0.5849
122 L A 0.7050
123 S A 0.2053
124 W A 1.0488
125 M A 0.8150
126 E A -0.1493
127 S A 0.0103
128 I A 0.7170
129 I A 0.2635
130 R A -2.1725
131 Q A -1.9285
132 I A -0.9221
133 E A -2.6877
134 T A -2.3056
135 Q A -2.6373
136 E A -3.0465
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Laboratory of Theory of Biopolymers 2018