| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKFGDTENPTEPQHCGPDDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPVGHPLPDAPPPSALYVRPPPSSPYWVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPEENIYNPENFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9481 | |
| 2 | L | A | 1.9715 | |
| 3 | P | A | 0.6574 | |
| 4 | P | A | 0.3576 | |
| 5 | T | A | 0.1231 | |
| 6 | T | A | 0.1417 | |
| 7 | P | A | 0.1894 | |
| 8 | V | A | 1.2175 | |
| 9 | A | A | 0.0335 | |
| 10 | K | A | -1.1471 | |
| 11 | V | A | -0.3951 | |
| 12 | Q | A | -1.5081 | |
| 13 | S | A | -1.5818 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3870 | |
| 16 | E | A | -2.4197 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4655 | |
| 20 | P | A | 0.1099 | |
| 21 | T | A | 0.1144 | |
| 22 | S | A | -0.1713 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1082 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1758 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7760 | |
| 31 | R | A | -2.6231 | |
| 32 | L | A | -0.7538 | |
| 33 | L | A | 1.1729 | |
| 34 | T | A | 1.3530 | |
| 35 | V | A | 1.7847 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2557 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.2143 | |
| 40 | A | A | 0.0829 | |
| 41 | D | A | -0.0973 | |
| 42 | I | A | 1.5023 | |
| 43 | V | A | 1.3500 | |
| 44 | K | A | -1.1226 | |
| 45 | N | A | -1.9217 | |
| 46 | G | A | -1.1914 | |
| 47 | K | A | -0.9096 | |
| 48 | V | A | 1.7165 | |
| 49 | V | A | 2.1138 | |
| 50 | V | A | 1.5637 | |
| 51 | P | A | 0.8100 | |
| 52 | K | A | -0.0225 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1128 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4543 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2604 | |
| 70 | K | A | -1.8058 | |
| 71 | F | A | -0.6578 | |
| 72 | A | A | -0.5711 | |
| 73 | L | A | -0.8604 | |
| 74 | P | A | -1.2659 | |
| 75 | Q | A | -2.4785 | |
| 76 | K | A | -3.0968 | |
| 77 | D | A | -2.9912 | |
| 78 | F | A | -1.6482 | |
| 79 | Y | A | -1.9264 | |
| 80 | D | A | -2.7710 | |
| 81 | P | A | -2.3566 | |
| 82 | E | A | -3.0788 | |
| 83 | K | A | -3.4424 | |
| 84 | E | A | -2.5027 | |
| 85 | R | A | -1.3165 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6475 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9575 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3000 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6797 | |
| 99 | G | A | -0.5506 | |
| 100 | P | A | -0.4357 | |
| 101 | L | A | -0.0141 | |
| 102 | G | A | -0.2704 | |
| 103 | K | A | -0.7329 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4611 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1398 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4138 | |
| 110 | L | A | 0.2590 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1856 | |
| 113 | K | A | -0.3769 | |
| 114 | F | A | 0.0000 | |
| 115 | G | A | -1.3797 | |
| 116 | D | A | -1.7189 | |
| 117 | T | A | -1.3733 | |
| 118 | E | A | -2.6115 | |
| 119 | N | A | -2.6398 | |
| 120 | P | A | -2.2257 | |
| 121 | T | A | -1.8913 | |
| 122 | E | A | -2.4312 | |
| 123 | P | A | -1.4426 | |
| 124 | Q | A | -1.7996 | |
| 125 | H | A | -1.2468 | |
| 126 | C | A | -1.0888 | |
| 127 | G | A | -1.4175 | |
| 128 | P | A | -1.5130 | |
| 129 | D | A | -2.2893 | |
| 130 | D | A | -1.8610 | |
| 131 | R | A | -1.2051 | |
| 132 | V | A | 0.2032 | |
| 133 | A | A | 0.4531 | |
| 134 | F | A | 0.2887 | |
| 135 | S | A | -0.0650 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7121 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2558 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5486 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2253 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1176 | |
| 157 | D | A | 0.3648 | |
| 158 | I | A | 0.8600 | |
| 159 | A | A | 0.1226 | |
| 160 | E | A | -1.4729 | |
| 161 | P | A | -0.2322 | |
| 162 | C | A | 0.1881 | |
| 163 | P | A | -0.1595 | |
| 164 | G | A | -0.0535 | |
| 165 | L | A | 0.6310 | |
| 166 | P | A | -0.0895 | |
| 167 | P | A | -0.3296 | |
| 168 | G | A | -0.4118 | |
| 169 | A | A | -0.0126 | |
| 170 | C | A | 0.7533 | |
| 171 | P | A | 0.5548 | |
| 172 | P | A | 0.7861 | |
| 173 | I | A | 2.0367 | |
| 174 | Q | A | 0.8410 | |
| 175 | L | A | 1.4345 | |
| 176 | V | A | 0.8254 | |
| 177 | N | A | -0.2949 | |
| 178 | S | A | 0.0312 | |
| 179 | V | A | 0.4421 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3814 | |
| 182 | D | A | 0.0854 | |
| 183 | G | A | -0.1634 | |
| 184 | D | A | -0.5432 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1394 | |
| 190 | F | A | 0.0627 | |
| 191 | G | A | -0.1016 | |
| 192 | N | A | -0.2681 | |
| 193 | M | A | -0.1272 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3890 | |
| 197 | E | A | -2.6033 | |
| 198 | L | A | -1.2134 | |
| 199 | Q | A | -2.5383 | |
| 200 | Q | A | -3.3428 | |
| 201 | D | A | -3.6022 | |
| 202 | R | A | -3.3547 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4353 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3851 | |
| 211 | S | A | -1.7101 | |
| 212 | T | A | -1.4429 | |
| 213 | R | A | -2.0910 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1677 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3147 | |
| 220 | L | A | 0.5383 | |
| 221 | K | A | -1.2331 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9415 | |
| 224 | N | A | -1.5532 | |
| 225 | E | A | -1.3077 | |
| 226 | A | A | -0.6752 | |
| 227 | Y | A | -0.4624 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6988 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1420 | |
| 234 | F | A | 0.0210 | |
| 235 | G | A | -0.9612 | |
| 236 | R | A | -2.7646 | |
| 237 | R | A | -3.1376 | |
| 238 | E | A | -2.2981 | |
| 239 | Q | A | -0.2410 | |
| 240 | V | A | 1.4980 | |
| 241 | Y | A | 1.2345 | |
| 242 | A | A | 0.1364 | |
| 243 | R | A | -1.2024 | |
| 244 | H | A | -1.2533 | |
| 245 | F | A | -0.3804 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.2223 | |
| 248 | R | A | -0.4918 | |
| 249 | C | A | -0.8505 | |
| 250 | G | A | -0.7512 | |
| 251 | P | A | -0.5089 | |
| 252 | V | A | -0.4450 | |
| 253 | G | A | -0.9038 | |
| 254 | H | A | -1.1265 | |
| 255 | P | A | -0.7474 | |
| 256 | L | A | -0.0162 | |
| 257 | P | A | -0.8237 | |
| 258 | D | A | -1.8593 | |
| 259 | A | A | -0.6780 | |
| 260 | P | A | -0.8641 | |
| 261 | P | A | -0.5271 | |
| 262 | P | A | 0.0033 | |
| 263 | S | A | 0.2714 | |
| 264 | A | A | 0.9737 | |
| 265 | L | A | 1.7693 | |
| 266 | Y | A | 1.3933 | |
| 267 | V | A | 1.5105 | |
| 268 | R | A | 0.1238 | |
| 269 | P | A | 0.3214 | |
| 270 | P | A | -0.3122 | |
| 271 | P | A | -0.1625 | |
| 272 | S | A | -0.2674 | |
| 273 | S | A | 0.1872 | |
| 274 | P | A | 0.1944 | |
| 275 | Y | A | 1.3825 | |
| 276 | W | A | 1.4327 | |
| 277 | V | A | 2.2888 | |
| 278 | L | A | 1.7531 | |
| 279 | P | A | 0.5372 | |
| 280 | P | A | 0.2263 | |
| 281 | Y | A | 0.2363 | |
| 282 | D | A | -0.3900 | |
| 283 | Y | A | 0.9611 | |
| 284 | F | A | 0.7108 | |
| 285 | G | A | 0.0554 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9127 | |
| 291 | L | A | 1.6195 | |
| 292 | V | A | 0.6332 | |
| 293 | S | A | -0.1442 | |
| 294 | S | A | -0.9679 | |
| 295 | D | A | -1.8387 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1604 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6105 | |
| 301 | R | A | -1.8385 | |
| 302 | P | A | -0.9522 | |
| 303 | F | A | -0.1805 | |
| 304 | W | A | -0.5181 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0810 | |
| 307 | R | A | -2.9198 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6526 | |
| 310 | G | A | -1.4166 | |
| 311 | N | A | -1.3757 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9057 | |
| 319 | N | A | -0.8876 | |
| 320 | E | A | -1.0473 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3774 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1209 | |
| 333 | N | A | 0.5161 | |
| 334 | F | A | 1.7255 | |
| 335 | T | A | 0.8715 | |
| 336 | I | A | 0.4445 | |
| 337 | S | A | -1.0447 | |
| 338 | Q | A | -1.9044 | |
| 339 | Q | A | -1.8441 | |
| 340 | L | A | -0.0406 | |
| 341 | S | A | -0.4498 | |
| 342 | T | A | -0.8295 | |
| 343 | P | A | -1.2466 | |
| 344 | E | A | -2.4497 | |
| 345 | E | A | -2.5997 | |
| 346 | N | A | -1.3859 | |
| 347 | I | A | 0.8911 | |
| 348 | Y | A | 0.8713 | |
| 349 | N | A | -0.5017 | |
| 350 | P | A | -1.5578 | |
| 351 | E | A | -2.1097 | |
| 352 | N | A | -1.5841 | |
| 353 | F | A | -1.6127 | |
| 354 | K | A | -2.2751 | |
| 355 | N | A | -1.8141 | |
| 356 | Y | A | -0.0991 | |
| 357 | L | A | 0.6400 | |
| 358 | R | A | 0.9420 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3344 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0341 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9115 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6771 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2825 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3227 | |
| 376 | L | A | -1.7540 | |
| 377 | D | A | -2.0138 | |
| 378 | P | A | -1.0540 | |
| 379 | G | A | -1.0140 | |
| 380 | V | A | -0.9240 | |
| 381 | L | A | -0.5361 | |
| 382 | A | A | -0.6570 | |
| 383 | H | A | -0.8430 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3988 | |
| 386 | T | A | -0.5752 | |
| 387 | M | A | -0.3323 | |
| 388 | N | A | -0.8708 | |
| 389 | P | A | -1.2674 | |
| 390 | T | A | -1.5361 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5315 | |
| 393 | E | A | -2.9307 | |
| 394 | N | A | -2.6375 | |
| 395 | W | A | -1.5248 | |
| 396 | N | A | -1.2401 | |
| 397 | L | A | -0.2683 | |
| 398 | G | A | 0.5100 | |
| 399 | F | A | 2.4133 | |
| 400 | V | A | 1.8457 | |
| 401 | P | A | 0.0532 | |
| 402 | P | A | -1.8762 | |
| 403 | K | A | -3.4299 | |
| 404 | E | A | -3.9092 | |
| 405 | R | A | -4.2380 | |
| 406 | E | A | -3.9083 | |
| 407 | D | A | -2.9102 | |
| 408 | P | A | -1.7870 | |
| 409 | Y | A | -0.9833 | |
| 410 | K | A | -2.0977 | |
| 411 | G | A | -0.6404 | |
| 412 | L | A | 0.6657 | |
| 413 | I | A | 1.5860 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3838 | |
| 416 | E | A | -1.6391 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8317 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8779 | |
| 421 | E | A | -2.4842 | |
| 422 | R | A | -1.9786 | |
| 423 | F | A | -1.0075 | |
| 424 | S | A | -1.3145 | |
| 425 | Q | A | -1.7928 | |
| 426 | D | A | -2.9109 | |
| 427 | L | A | -2.0242 | |
| 428 | D | A | -2.8341 | |
| 429 | Q | A | -2.6387 | |
| 430 | F | A | -1.4675 | |
| 431 | A | A | -0.9281 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6538 | |
| 435 | K | A | -0.7794 | |
| 436 | F | A | 0.1194 | |
| 437 | L | A | 1.0014 | |
| 438 | Y | A | 0.7978 | |
| 439 | Q | A | -0.2805 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine