Project name: ref1

Status: done

Started: 2026-03-05 14:14:31
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Chain sequence(s) A: MAEDEDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKDASIQVVSAIRAAPEAARSLASSLPGQTKILAKVFYGEN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:15)
Show buried residues

Minimal score value
-4.6661
Maximal score value
2.961
Average score
-0.0816
Total score value
-11.2554

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.4325
2 A A -1.0382
3 E A -3.1637
4 D A -4.0628
5 E A -4.6661
6 D A -4.6327
7 N A -4.1028
8 Q A -3.6562
9 Q A -3.6464
10 G A -2.8718
11 Q A -2.7971
12 G A -2.2255
13 E A -2.4933
14 G A -1.0126
15 L A 0.4577
16 K A -0.9216
17 Y A 0.3296
18 L A 1.3620
19 G A 0.1887
20 F A 0.4182
21 V A 0.6729
22 Q A -0.9933
23 D A -1.3767
24 A A -0.0468
25 A A 0.2638
26 T A 0.3602
27 Y A 1.0261
28 A A 1.4275
29 V A 2.0959
30 T A 1.2638
31 T A 1.3376
32 F A 2.4541
33 S A 1.5333
34 N A 0.5150
35 V A 1.2965
36 Y A 1.0689
37 L A 1.1376
38 F A 0.7572
39 A A -0.4055
40 K A -1.6501
41 D A -2.3065
42 K A -2.3205
43 S A -1.5148
44 G A -1.4410
45 P A -0.4761
46 L A 0.1976
47 Q A -1.1046
48 P A -0.5268
49 G A -0.2141
50 V A -0.4270
51 D A -1.2320
52 I A 1.0621
53 I A 0.5832
54 E A -1.0003
55 G A -0.8542
56 P A -0.5546
57 V A 0.1875
58 K A -1.4344
59 N A -1.2832
60 V A 0.5039
61 A A 0.5517
62 V A 1.2262
63 P A 0.3727
64 L A 0.8892
65 Y A 1.5103
66 N A -0.3309
67 R A -0.1193
68 F A 2.0181
69 S A 1.1475
70 Y A 1.7998
71 I A 2.1126
72 P A 0.7247
73 N A -0.7821
74 G A -0.0587
75 A A 0.4726
76 L A 0.2216
77 K A -1.2625
78 F A 0.7746
79 V A 1.5832
80 D A -0.3395
81 S A 0.5301
82 T A 1.2456
83 V A 2.1206
84 V A 2.8725
85 A A 1.9709
86 S A 2.0919
87 V A 2.9610
88 T A 1.6420
89 I A 2.1242
90 I A 1.1648
91 D A -0.6291
92 R A -1.3663
93 S A -0.4890
94 L A 0.2611
95 P A -0.1302
96 P A -0.0299
97 I A 1.4562
98 V A 0.9281
99 K A 0.1099
100 D A -0.7653
101 A A 0.1312
102 S A 0.8790
103 I A 1.4058
104 Q A -0.4121
105 V A 0.5797
106 V A 0.7988
107 S A -0.0021
108 A A -0.2117
109 I A -0.3661
110 R A -1.7351
111 A A -0.8090
112 A A -1.1148
113 P A -1.3792
114 E A -2.1355
115 A A -0.9535
116 A A -0.7319
117 R A -1.3640
118 S A -0.3155
119 L A 1.1740
120 A A 0.3116
121 S A 0.2753
122 S A 0.6625
123 L A 1.3309
124 P A -0.1867
125 G A -0.5183
126 Q A -0.3683
127 T A -0.6560
128 K A -1.2038
129 I A 1.1839
130 L A 1.2427
131 A A 0.5461
132 K A -0.0902
133 V A 2.2692
134 F A 2.9172
135 Y A 1.3429
136 G A -0.5069
137 E A -2.2198
138 N A -2.0867
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Laboratory of Theory of Biopolymers 2018