| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPLHCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPEGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPDGHPRPDAPPPSPLYTRPPPSSPFATPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQVSTPAVNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9443 | |
| 2 | L | A | 1.9648 | |
| 3 | P | A | 0.8356 | |
| 4 | P | A | 0.3760 | |
| 5 | T | A | 0.1219 | |
| 6 | T | A | 0.1307 | |
| 7 | P | A | 0.1802 | |
| 8 | V | A | 1.2123 | |
| 9 | A | A | 0.0827 | |
| 10 | K | A | -1.0408 | |
| 11 | V | A | -0.1945 | |
| 12 | Q | A | -1.4202 | |
| 13 | S | A | -1.5488 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3688 | |
| 16 | E | A | -2.4159 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4693 | |
| 20 | P | A | 0.1345 | |
| 21 | T | A | 0.1608 | |
| 22 | S | A | -0.0936 | |
| 23 | L | A | 0.0961 | |
| 24 | F | A | -0.0384 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2834 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9007 | |
| 31 | R | A | -2.6887 | |
| 32 | L | A | -0.8047 | |
| 33 | L | A | 1.1601 | |
| 34 | T | A | 1.3738 | |
| 35 | V | A | 1.8405 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1942 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6244 | |
| 40 | K | A | -1.6387 | |
| 41 | D | A | -0.9347 | |
| 42 | I | A | 0.8208 | |
| 43 | V | A | 1.0178 | |
| 44 | K | A | -1.1697 | |
| 45 | N | A | -1.9211 | |
| 46 | G | A | -1.2210 | |
| 47 | K | A | -0.9674 | |
| 48 | V | A | 1.4473 | |
| 49 | V | A | 2.0182 | |
| 50 | V | A | 1.2372 | |
| 51 | P | A | 0.4323 | |
| 52 | K | A | -0.6441 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1497 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3731 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2284 | |
| 70 | K | A | -1.7761 | |
| 71 | F | A | -0.6381 | |
| 72 | A | A | -0.5804 | |
| 73 | L | A | -0.8739 | |
| 74 | P | A | -1.2172 | |
| 75 | Q | A | -2.5122 | |
| 76 | K | A | -3.1164 | |
| 77 | D | A | -2.9959 | |
| 78 | F | A | -1.6737 | |
| 79 | Y | A | -1.8985 | |
| 80 | D | A | -2.7110 | |
| 81 | P | A | -2.3170 | |
| 82 | E | A | -3.0652 | |
| 83 | K | A | -3.4043 | |
| 84 | E | A | -2.4732 | |
| 85 | R | A | -1.3064 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.7002 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9611 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3631 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6925 | |
| 99 | G | A | -0.5193 | |
| 100 | P | A | -0.3717 | |
| 101 | L | A | 0.1084 | |
| 102 | G | A | -0.1805 | |
| 103 | K | A | -0.6236 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4276 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1518 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4428 | |
| 110 | L | A | 0.3340 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0845 | |
| 113 | K | A | -0.3550 | |
| 114 | L | A | -0.7747 | |
| 115 | G | A | -0.9950 | |
| 116 | D | A | -1.3458 | |
| 117 | T | A | -1.0687 | |
| 118 | E | A | -1.8541 | |
| 119 | N | A | -2.2226 | |
| 120 | P | A | -1.9292 | |
| 121 | T | A | -1.6130 | |
| 122 | E | A | -2.3322 | |
| 123 | P | A | -1.0280 | |
| 124 | L | A | -0.7319 | |
| 125 | H | A | -0.9781 | |
| 126 | C | A | -0.7475 | |
| 127 | G | A | -1.2433 | |
| 128 | A | A | -1.1557 | |
| 129 | D | A | -2.1667 | |
| 130 | D | A | -1.7208 | |
| 131 | R | A | -1.0998 | |
| 132 | V | A | 0.2598 | |
| 133 | A | A | 0.4674 | |
| 134 | F | A | 0.2902 | |
| 135 | S | A | -0.0642 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4895 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2846 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5690 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1865 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1587 | |
| 157 | D | A | 0.3373 | |
| 158 | L | A | 0.8331 | |
| 159 | A | A | 0.1907 | |
| 160 | E | A | -1.4493 | |
| 161 | P | A | -0.2000 | |
| 162 | C | A | 0.1936 | |
| 163 | P | A | -0.1480 | |
| 164 | G | A | -0.2296 | |
| 165 | L | A | 0.2804 | |
| 166 | P | A | -0.8296 | |
| 167 | E | A | -1.8882 | |
| 168 | G | A | -1.1718 | |
| 169 | A | A | -0.5125 | |
| 170 | C | A | 0.4458 | |
| 171 | P | A | 0.3641 | |
| 172 | P | A | 0.8667 | |
| 173 | I | A | 1.9975 | |
| 174 | Q | A | 0.8529 | |
| 175 | L | A | 1.4916 | |
| 176 | V | A | 0.8643 | |
| 177 | N | A | -0.2788 | |
| 178 | S | A | 0.0416 | |
| 179 | V | A | 0.4397 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3829 | |
| 182 | D | A | 0.0843 | |
| 183 | G | A | -0.1618 | |
| 184 | D | A | -0.5234 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0848 | |
| 190 | F | A | 0.0654 | |
| 191 | G | A | -0.1001 | |
| 192 | N | A | -0.2440 | |
| 193 | M | A | -0.1008 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4159 | |
| 197 | E | A | -2.6709 | |
| 198 | L | A | -1.2623 | |
| 199 | Q | A | -2.5882 | |
| 200 | Q | A | -3.3384 | |
| 201 | D | A | -3.5913 | |
| 202 | R | A | -3.3378 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2197 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3384 | |
| 211 | S | A | -1.8693 | |
| 212 | T | A | -1.4049 | |
| 213 | R | A | -2.0331 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1535 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3248 | |
| 220 | L | A | 0.6062 | |
| 221 | K | A | -1.1069 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8870 | |
| 224 | N | A | -1.4954 | |
| 225 | E | A | -1.2369 | |
| 226 | A | A | -0.6127 | |
| 227 | Y | A | -0.4141 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6575 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1487 | |
| 234 | F | A | 0.0121 | |
| 235 | G | A | -0.9325 | |
| 236 | R | A | -2.6899 | |
| 237 | R | A | -2.9813 | |
| 238 | E | A | -2.2313 | |
| 239 | Q | A | -0.2870 | |
| 240 | V | A | 1.3180 | |
| 241 | Y | A | 1.0623 | |
| 242 | A | A | 0.1684 | |
| 243 | R | A | -1.0354 | |
| 244 | H | A | -0.9743 | |
| 245 | F | A | 0.0292 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5902 | |
| 249 | C | A | -0.9076 | |
| 250 | G | A | -0.9280 | |
| 251 | P | A | -0.9262 | |
| 252 | D | A | -1.5374 | |
| 253 | G | A | -1.4124 | |
| 254 | H | A | -1.6887 | |
| 255 | P | A | -1.6163 | |
| 256 | R | A | -1.2504 | |
| 257 | P | A | -1.2780 | |
| 258 | D | A | -2.1714 | |
| 259 | A | A | -1.2484 | |
| 260 | P | A | -1.2598 | |
| 261 | P | A | -1.0866 | |
| 262 | P | A | -0.5011 | |
| 263 | S | A | -0.3901 | |
| 264 | P | A | 0.4692 | |
| 265 | L | A | 1.1778 | |
| 266 | Y | A | 0.4086 | |
| 267 | T | A | -0.6405 | |
| 268 | R | A | -1.8525 | |
| 269 | P | A | -0.7867 | |
| 270 | P | A | -0.7032 | |
| 271 | P | A | -0.5549 | |
| 272 | S | A | -0.2499 | |
| 273 | S | A | -0.0846 | |
| 274 | P | A | 0.0030 | |
| 275 | F | A | 0.8432 | |
| 276 | A | A | 0.0965 | |
| 277 | T | A | 0.0329 | |
| 278 | P | A | -0.0143 | |
| 279 | P | A | -0.2727 | |
| 280 | P | A | -0.6366 | |
| 281 | T | A | -0.6610 | |
| 282 | D | A | -1.0914 | |
| 283 | Y | A | 0.7447 | |
| 284 | F | A | 0.6398 | |
| 285 | G | A | 0.2150 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8777 | |
| 291 | L | A | 1.5961 | |
| 292 | V | A | 0.6296 | |
| 293 | S | A | -0.1494 | |
| 294 | S | A | -0.9499 | |
| 295 | D | A | -1.8432 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1198 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6297 | |
| 301 | R | A | -1.8304 | |
| 302 | P | A | -0.9437 | |
| 303 | F | A | -0.2240 | |
| 304 | W | A | -0.5744 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0962 | |
| 307 | R | A | -2.9257 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6612 | |
| 310 | G | A | -1.4228 | |
| 311 | N | A | -1.3561 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7871 | |
| 319 | N | A | -0.9155 | |
| 320 | E | A | -1.0329 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3111 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0557 | |
| 333 | N | A | 0.5897 | |
| 334 | F | A | 1.7847 | |
| 335 | T | A | 0.9416 | |
| 336 | I | A | 0.4584 | |
| 337 | S | A | -0.8839 | |
| 338 | Q | A | -1.5584 | |
| 339 | Q | A | -0.8487 | |
| 340 | V | A | 0.8427 | |
| 341 | S | A | 0.4871 | |
| 342 | T | A | 0.1232 | |
| 343 | P | A | -0.1578 | |
| 344 | A | A | 0.3276 | |
| 345 | V | A | 0.8323 | |
| 346 | N | A | 0.0681 | |
| 347 | V | A | 1.7476 | |
| 348 | Y | A | 1.5524 | |
| 349 | D | A | -0.0173 | |
| 350 | P | A | -0.6532 | |
| 351 | S | A | -0.4960 | |
| 352 | N | A | -0.0643 | |
| 353 | F | A | -0.7668 | |
| 354 | K | A | -2.0661 | |
| 355 | N | A | -1.7855 | |
| 356 | Y | A | 0.0245 | |
| 357 | L | A | 0.7551 | |
| 358 | R | A | 1.0177 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3924 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0852 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0677 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6923 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2780 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3061 | |
| 376 | L | A | -1.7027 | |
| 377 | D | A | -1.9548 | |
| 378 | P | A | -1.0205 | |
| 379 | G | A | -1.0030 | |
| 380 | V | A | -0.9214 | |
| 381 | L | A | -0.5188 | |
| 382 | A | A | -0.6475 | |
| 383 | H | A | -0.8050 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4110 | |
| 386 | T | A | -0.5553 | |
| 387 | M | A | -0.3036 | |
| 388 | N | A | -0.8632 | |
| 389 | P | A | -1.2357 | |
| 390 | T | A | -1.4226 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4316 | |
| 393 | E | A | -2.7636 | |
| 394 | N | A | -2.3453 | |
| 395 | W | A | -1.3700 | |
| 396 | N | A | -1.1471 | |
| 397 | L | A | -0.2210 | |
| 398 | G | A | 0.5046 | |
| 399 | F | A | 2.4008 | |
| 400 | V | A | 1.8068 | |
| 401 | P | A | 0.0455 | |
| 402 | P | A | -1.8374 | |
| 403 | K | A | -3.3059 | |
| 404 | E | A | -3.7411 | |
| 405 | R | A | -3.8360 | |
| 406 | E | A | -3.7418 | |
| 407 | D | A | -2.8348 | |
| 408 | P | A | -1.7474 | |
| 409 | Y | A | -0.9822 | |
| 410 | K | A | -2.1048 | |
| 411 | G | A | -0.6379 | |
| 412 | L | A | 0.6737 | |
| 413 | I | A | 1.5876 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3892 | |
| 416 | E | A | -1.6821 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9473 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0381 | |
| 421 | E | A | -2.7697 | |
| 422 | R | A | -2.6085 | |
| 423 | F | A | -1.3069 | |
| 424 | S | A | -1.4648 | |
| 425 | Q | A | -1.8530 | |
| 426 | D | A | -2.9042 | |
| 427 | L | A | -2.0048 | |
| 428 | D | A | -2.7921 | |
| 429 | Q | A | -2.6249 | |
| 430 | F | A | -1.4447 | |
| 431 | A | A | -0.9256 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6670 | |
| 435 | K | A | -0.7539 | |
| 436 | F | A | 0.1137 | |
| 437 | L | A | 0.9986 | |
| 438 | Y | A | 0.7998 | |
| 439 | Q | A | -0.2845 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine