Project name: b95aeb02f85af7e

Status: done

Started: 2026-01-18 06:24:10
Settings
Chain sequence(s) H: VQLVESGGGVVQPGRSLRLSCAASGFTFSNYGMHWVRQAPGKGLDWVAVISYDGSDKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDRGTPLAGDYYFDYWGQGTLVTVSS
L: QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLIIYEVTNRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNWVFGGGTK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:53)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:55)
Show buried residues

Minimal score value
-2.9733
Maximal score value
1.775
Average score
-0.6303
Total score value
-143.6977

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 V H 0.8937
3 Q H -0.4159
4 L H 0.0000
5 V H 0.0464
6 E H 0.0000
7 S H -0.3265
8 G H -0.5158
9 G H 0.3229
11 G H 0.9468
12 V H 1.7750
13 V H -0.0169
14 Q H -1.2185
15 P H -1.8330
16 G H -2.0683
17 R H -2.6051
18 S H -1.5836
19 L H -0.7462
20 R H -1.0868
21 L H 0.0000
22 S H -0.3174
23 C H 0.0000
24 A H -0.4524
25 A H 0.0000
26 S H -0.2873
27 G H -0.1041
28 F H 0.0837
29 T H -0.2008
30 F H 0.0000
35 S H -1.1357
36 N H -0.8747
37 Y H -0.3296
38 G H 0.0000
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.5567
45 A H -0.9964
46 P H -0.8073
47 G H -1.4790
48 K H -2.2248
49 G H -1.3997
50 L H 0.0000
51 D H -0.7332
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 V H 0.0000
56 I H 0.0000
57 S H -0.7169
58 Y H -0.5388
59 D H -2.0082
62 G H -1.5153
63 S H -1.3011
64 D H -1.5719
65 K H -1.1308
66 Y H -0.5595
67 Y H -0.8371
68 A H 0.0000
69 D H -2.4987
70 S H -1.8097
71 V H 0.0000
72 K H -2.0511
74 G H -1.4820
75 R H -1.2483
76 F H 0.0000
77 T H -0.6590
78 I H 0.0000
79 S H -0.7220
80 R H -1.0315
81 D H -1.6037
82 N H -1.8118
83 S H -1.4912
84 K H -2.2978
85 N H -1.6407
86 T H -1.0100
87 L H 0.0000
88 Y H -0.2816
89 L H 0.0000
90 Q H -0.7093
91 M H 0.0000
92 N H -1.6041
93 S H -1.6806
94 L H 0.0000
95 R H -2.4157
96 A H -1.6175
97 E H -2.2350
98 D H 0.0000
99 T H -0.3178
100 A H 0.0000
101 V H 0.7947
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 D H 0.0000
108 R H -1.3822
109 G H -0.5853
110 T H -0.1623
111 P H 0.2814
111A L H 1.4565
112B A H 0.4031
112A G H 0.1014
112 D H -0.5410
113 Y H -0.1228
114 Y H 0.0000
115 F H 0.0000
116 D H -0.3491
117 Y H 0.4885
118 W H -0.0085
119 G H 0.0000
120 Q H -1.4748
121 G H -0.3872
122 T H 0.4584
123 L H 1.6999
124 V H 0.0000
125 T H 0.5010
126 V H 0.0000
127 S H -0.4648
128 S H -0.4708
1 Q L -1.6006
2 S L -0.8232
3 A L -0.5842
4 L L 0.0000
5 T L -0.3663
6 Q L -0.6583
7 P L -0.7190
8 P L -1.0083
9 S L -1.1767
11 A L -0.8261
12 S L -1.0966
13 G L -1.1012
14 S L -1.0883
15 P L -1.3003
16 G L -1.5053
17 Q L -1.8634
18 S L -1.0624
19 V L -0.3857
20 T L -0.1458
21 I L 0.0000
22 S L -0.2619
23 C L 0.0000
24 T L -0.5421
25 G L -0.6005
26 T L -0.6653
27 S L -0.7938
28 S L -0.5528
29 D L 0.0000
30 V L 0.0000
31 G L -1.2126
35 G L -0.9133
36 Y L -0.5962
37 N L -1.3163
38 Y L -0.4266
39 V L 0.0000
40 S L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 H L -1.9215
46 P L -1.4734
47 G L -1.6239
48 K L -2.4751
49 A L -1.4339
50 P L 0.0000
51 K L -0.9656
52 L L 0.0000
53 I L 0.0000
54 I L 0.0000
55 Y L -0.9880
56 E L -1.1885
57 V L 0.0000
65 T L -1.1829
66 N L -1.6681
67 R L -1.8298
68 P L -0.9940
69 S L -0.7488
70 G L -0.8561
71 V L -0.9751
72 P L -1.2940
74 D L -2.2101
75 R L -1.3921
76 F L 0.0000
77 S L -1.0114
78 G L 0.0000
79 S L -0.8816
80 K L -1.2436
83 S L -0.9369
84 G L -1.1832
85 N L -1.2890
86 T L -0.8719
87 A L 0.0000
88 S L -0.3796
89 L L 0.0000
90 T L -0.1987
91 V L 0.0000
92 S L -1.1711
93 G L -1.3930
94 L L -1.6683
95 Q L -2.0702
96 A L -1.8127
97 E L -2.6579
98 D L 0.0000
99 E L -2.9733
100 A L -2.1313
101 D L -1.4586
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 S L 0.0000
106 S L 0.0000
107 Y L -0.1173
108 A L -0.2227
109 G L -0.3414
113 S L -0.3496
114 N L -0.5444
115 N L -0.5082
116 W L 0.0000
117 V L 0.0000
118 F L 0.0000
119 G L 0.0000
120 G L -1.1133
121 G L 0.0000
122 T L 0.0000
123 K L -2.3447
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Laboratory of Theory of Biopolymers 2018