| Chain sequence(s) |
D: EQPLVLTLLTDASGRKWIVATAREENAPALEALAKKRGPPEHSYSGNRDA
F: QGAIEVGRTLLWPATPEDAELLAQPPTPLAVNGSVNVNIGT input PDB |
| Selected Chain(s) | D,F |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46)
[INFO] Main: Simulation completed successfully. (00:00:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | D | -1.9916 | |
| 2 | Q | D | -1.2727 | |
| 3 | P | D | -0.4111 | |
| 4 | L | D | 0.3930 | |
| 5 | V | D | 1.6610 | |
| 6 | L | D | 1.0614 | |
| 7 | T | D | 0.2084 | |
| 8 | L | D | 0.5764 | |
| 9 | L | D | 1.1055 | |
| 10 | T | D | -0.1815 | |
| 11 | D | D | -0.7072 | |
| 12 | A | D | -0.1036 | |
| 13 | S | D | -0.2509 | |
| 14 | G | D | -0.4636 | |
| 15 | R | D | -1.1033 | |
| 16 | K | D | -1.3117 | |
| 17 | W | D | 0.0421 | |
| 18 | I | D | 0.0000 | |
| 19 | V | D | 0.2148 | |
| 20 | A | D | 0.0000 | |
| 21 | T | D | 0.1408 | |
| 22 | A | D | 0.0000 | |
| 23 | R | D | -1.7982 | |
| 24 | E | D | -2.4076 | |
| 25 | E | D | -2.1873 | |
| 26 | N | D | -0.5781 | |
| 27 | A | D | -0.0818 | |
| 28 | P | D | -0.4029 | |
| 29 | A | D | -0.0297 | |
| 30 | L | D | 0.0000 | |
| 31 | E | D | -1.5143 | |
| 32 | A | D | -0.1990 | |
| 33 | L | D | 0.2898 | |
| 34 | A | D | -0.4001 | |
| 35 | K | D | -2.0049 | |
| 36 | K | D | -2.1380 | |
| 37 | R | D | -1.0645 | |
| 38 | G | D | -0.3216 | |
| 39 | P | D | -0.2916 | |
| 40 | P | D | -0.3211 | |
| 41 | E | D | -1.2489 | |
| 42 | H | D | -0.9284 | |
| 43 | S | D | -0.0921 | |
| 44 | Y | D | 1.2365 | |
| 45 | S | D | -0.0568 | |
| 46 | G | D | -0.7171 | |
| 47 | N | D | -1.6435 | |
| 48 | R | D | -2.3447 | |
| 49 | D | D | -2.0868 | |
| 50 | A | D | -0.2495 | |
| 1 | Q | F | -1.2772 | |
| 2 | G | F | -0.6588 | |
| 3 | A | F | 0.2638 | |
| 4 | I | F | 1.3121 | |
| 5 | E | F | -1.3670 | |
| 6 | V | F | 0.6930 | |
| 7 | G | F | -0.4324 | |
| 8 | R | F | -0.6957 | |
| 9 | T | F | -0.1307 | |
| 10 | L | F | 0.0000 | |
| 11 | L | F | 0.2080 | |
| 12 | W | F | 0.0000 | |
| 13 | P | F | -0.0526 | |
| 14 | A | F | 0.0078 | |
| 15 | T | F | -0.0684 | |
| 16 | P | F | -0.5775 | |
| 17 | E | F | -1.8949 | |
| 18 | D | F | -0.4813 | |
| 19 | A | F | -0.3393 | |
| 20 | E | F | -1.5442 | |
| 21 | L | F | 1.2926 | |
| 22 | L | F | 0.6573 | |
| 23 | A | F | -0.0859 | |
| 24 | Q | F | -1.2333 | |
| 25 | P | F | -0.5118 | |
| 26 | P | F | -0.3131 | |
| 27 | T | F | -0.1615 | |
| 28 | P | F | 0.0332 | |
| 29 | L | F | 1.5077 | |
| 30 | A | F | 0.6299 | |
| 31 | V | F | 1.5515 | |
| 32 | N | F | -1.0337 | |
| 33 | G | F | -0.7301 | |
| 34 | S | F | 0.0085 | |
| 35 | V | F | 1.5260 | |
| 36 | N | F | -0.6832 | |
| 37 | V | F | 1.3623 | |
| 38 | N | F | -0.6383 | |
| 39 | I | F | 1.7028 | |
| 40 | G | F | -0.1228 | |
| 41 | T | F | -0.1521 |