| Chain sequence(s) |
L: KNTGPAFGPFCD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:07)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 189 | K | L | -1.9341 | |
| 190 | N | L | -1.5869 | |
| 191 | T | L | -0.3145 | |
| 192 | G | L | -0.3191 | |
| 193 | P | L | -0.2593 | |
| 194 | A | L | 0.3723 | |
| 195 | F | L | 1.9342 | |
| 196 | G | L | -0.0747 | |
| 197 | P | L | 0.0747 | |
| 198 | F | L | 2.0271 | |
| 199 | C | L | 0.7552 | |
| 200 | D | L | -1.6716 |