Project name: b9f91a660b822e6

Status: done

Started: 2026-02-23 15:12:00
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Chain sequence(s) A: FKFKGHFKF
C: FKFKGHFKF
B: FKFKGHFKF
E: FKFKGHFKF
D: FKFKGHFKF
G: FKFKGHFKF
F: FKFKGHFKF
I: FKFKGHFKF
H: FKFKGHFKF
K: FKFKGHFKF
J: FKFKGHFKF
M: FKFKGHFKF
L: FKFKGHFKF
O: FKFKGHFKF
N: FKFKGHFKF
Q: FKFKGHFKF
P: FKFKGHFKF
S: FKFKGHFKF
R: FKFKGHFKF
T: FKFKGHFKF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:28:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:28:28)
Show buried residues

Minimal score value
-2.8969
Maximal score value
2.2892
Average score
-0.49
Total score value
-88.1984

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A -0.0360
2 K A -2.2591
3 F A 0.0000
4 K A -2.3074
5 G A 0.0000
6 H A -1.1261
7 F A 0.0000
8 K A -0.5633
9 F A 0.8274
1 F B 0.2677
2 K B -2.0995
3 F B 0.0000
4 K B -2.4570
5 G B 0.0000
6 H B -1.3221
7 F B 0.0000
8 K B -0.3797
9 F B 1.3075
1 F C 1.2056
2 K C -1.2988
3 F C -1.1796
4 K C -2.2925
5 G C -0.9418
6 H C -1.2804
7 F C -0.1895
8 K C -0.5359
9 F C 1.6108
1 F D 1.5315
2 K D -0.5919
3 F D -0.0276
4 K D -1.7578
5 G D -0.9090
6 H D -1.1046
7 F D 0.3771
8 K D -0.0811
9 F D 2.0195
1 F E 0.7674
2 K E -1.0735
3 F E 0.0000
4 K E -1.7772
5 G E 0.0000
6 H E -1.1626
7 F E 0.0000
8 K E 0.0513
9 F E 2.2892
1 F F 0.4867
2 K F -1.4290
3 F F 0.0000
4 K F -1.9699
5 G F 0.0000
6 H F -1.0934
7 F F 0.0000
8 K F -0.3150
9 F F 1.5496
1 F G 1.0962
2 K G -1.2513
3 F G 0.0000
4 K G -1.9804
5 G G -0.9985
6 H G -1.1515
7 F G 0.0000
8 K G -0.3426
9 F G 2.0872
1 F H 0.5543
2 K H -1.7175
3 F H 0.0000
4 K H -1.9592
5 G H 0.0000
6 H H -1.0135
7 F H 0.0000
8 K H -0.0708
9 F H 2.2625
1 F I 0.0180
2 K I -1.6058
3 F I 0.0000
4 K I -1.8801
5 G I 0.0000
6 H I -1.5803
7 F I 0.0000
8 K I -0.8865
9 F I 1.4613
1 F J -0.4470
2 K J -2.0830
3 F J 0.0000
4 K J -2.3194
5 G J 0.0000
6 H J -2.0609
7 F J 0.0000
8 K J -1.6519
9 F J 0.2992
1 F K -0.3953
2 K K -1.9881
3 F K 0.0000
4 K K -2.4974
5 G K 0.0000
6 H K -2.1862
7 F K 0.0000
8 K K -0.7827
9 F K 1.7684
1 F L -0.1166
2 K L -2.4455
3 F L 0.0000
4 K L -2.8969
5 G L 0.0000
6 H L -1.6258
7 F L 0.0000
8 K L -0.5020
9 F L 1.3493
1 F M 0.9495
2 K M -1.7955
3 F M -1.5845
4 K M -2.8761
5 G M 0.0000
6 H M -1.7634
7 F M 0.0000
8 K M -0.9410
9 F M 1.4411
1 F N 1.1179
2 K N -1.2489
3 F N -0.8424
4 K N -2.5653
5 G N -1.2178
6 H N -2.0240
7 F N -0.3964
8 K N -0.7464
9 F N 1.5368
1 F O -0.0018
2 K O -2.2333
3 F O 0.0000
4 K O -2.4596
5 G O -1.0542
6 H O -1.1904
7 F O 0.0000
8 K O -0.5745
9 F O 1.1304
1 F P -0.0369
2 K P -1.8813
3 F P 0.0000
4 K P -2.0490
5 G P 0.0000
6 H P -1.0863
7 F P 0.0000
8 K P -0.5749
9 F P 0.9820
1 F Q -0.0306
2 K Q -1.8875
3 F Q 0.0000
4 K Q -1.9571
5 G Q 0.0000
6 H Q -1.0482
7 F Q 0.0000
8 K Q -0.5708
9 F Q 0.8017
1 F R -0.0632
2 K R -1.6880
3 F R 0.0000
4 K R -1.7723
5 G R 0.0000
6 H R -1.1572
7 F R 0.0000
8 K R -0.2002
9 F R 1.4174
1 F S -0.0552
2 K S -1.7803
3 F S 0.0000
4 K S -2.1217
5 G S 0.0000
6 H S -1.0700
7 F S 0.0000
8 K S -0.5746
9 F S 0.6054
1 F T 0.4271
2 K T -1.1918
3 F T 0.0000
4 K T -2.0390
5 G T 0.0000
6 H T -1.1283
7 F T 0.0000
8 K T -0.0279
9 F T 1.7104
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Laboratory of Theory of Biopolymers 2018