| Chain sequence(s) |
A: FKFKGHFKF
C: FKFKGHFKF B: FKFKGHFKF E: FKFKGHFKF D: FKFKGHFKF G: FKFKGHFKF F: FKFKGHFKF I: FKFKGHFKF H: FKFKGHFKF K: FKFKGHFKF J: FKFKGHFKF M: FKFKGHFKF L: FKFKGHFKF O: FKFKGHFKF N: FKFKGHFKF Q: FKFKGHFKF P: FKFKGHFKF S: FKFKGHFKF R: FKFKGHFKF T: FKFKGHFKF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:28:23)
[INFO] Main: Simulation completed successfully. (00:28:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | -0.0360 | |
| 2 | K | A | -2.2591 | |
| 3 | F | A | 0.0000 | |
| 4 | K | A | -2.3074 | |
| 5 | G | A | 0.0000 | |
| 6 | H | A | -1.1261 | |
| 7 | F | A | 0.0000 | |
| 8 | K | A | -0.5633 | |
| 9 | F | A | 0.8274 | |
| 1 | F | B | 0.2677 | |
| 2 | K | B | -2.0995 | |
| 3 | F | B | 0.0000 | |
| 4 | K | B | -2.4570 | |
| 5 | G | B | 0.0000 | |
| 6 | H | B | -1.3221 | |
| 7 | F | B | 0.0000 | |
| 8 | K | B | -0.3797 | |
| 9 | F | B | 1.3075 | |
| 1 | F | C | 1.2056 | |
| 2 | K | C | -1.2988 | |
| 3 | F | C | -1.1796 | |
| 4 | K | C | -2.2925 | |
| 5 | G | C | -0.9418 | |
| 6 | H | C | -1.2804 | |
| 7 | F | C | -0.1895 | |
| 8 | K | C | -0.5359 | |
| 9 | F | C | 1.6108 | |
| 1 | F | D | 1.5315 | |
| 2 | K | D | -0.5919 | |
| 3 | F | D | -0.0276 | |
| 4 | K | D | -1.7578 | |
| 5 | G | D | -0.9090 | |
| 6 | H | D | -1.1046 | |
| 7 | F | D | 0.3771 | |
| 8 | K | D | -0.0811 | |
| 9 | F | D | 2.0195 | |
| 1 | F | E | 0.7674 | |
| 2 | K | E | -1.0735 | |
| 3 | F | E | 0.0000 | |
| 4 | K | E | -1.7772 | |
| 5 | G | E | 0.0000 | |
| 6 | H | E | -1.1626 | |
| 7 | F | E | 0.0000 | |
| 8 | K | E | 0.0513 | |
| 9 | F | E | 2.2892 | |
| 1 | F | F | 0.4867 | |
| 2 | K | F | -1.4290 | |
| 3 | F | F | 0.0000 | |
| 4 | K | F | -1.9699 | |
| 5 | G | F | 0.0000 | |
| 6 | H | F | -1.0934 | |
| 7 | F | F | 0.0000 | |
| 8 | K | F | -0.3150 | |
| 9 | F | F | 1.5496 | |
| 1 | F | G | 1.0962 | |
| 2 | K | G | -1.2513 | |
| 3 | F | G | 0.0000 | |
| 4 | K | G | -1.9804 | |
| 5 | G | G | -0.9985 | |
| 6 | H | G | -1.1515 | |
| 7 | F | G | 0.0000 | |
| 8 | K | G | -0.3426 | |
| 9 | F | G | 2.0872 | |
| 1 | F | H | 0.5543 | |
| 2 | K | H | -1.7175 | |
| 3 | F | H | 0.0000 | |
| 4 | K | H | -1.9592 | |
| 5 | G | H | 0.0000 | |
| 6 | H | H | -1.0135 | |
| 7 | F | H | 0.0000 | |
| 8 | K | H | -0.0708 | |
| 9 | F | H | 2.2625 | |
| 1 | F | I | 0.0180 | |
| 2 | K | I | -1.6058 | |
| 3 | F | I | 0.0000 | |
| 4 | K | I | -1.8801 | |
| 5 | G | I | 0.0000 | |
| 6 | H | I | -1.5803 | |
| 7 | F | I | 0.0000 | |
| 8 | K | I | -0.8865 | |
| 9 | F | I | 1.4613 | |
| 1 | F | J | -0.4470 | |
| 2 | K | J | -2.0830 | |
| 3 | F | J | 0.0000 | |
| 4 | K | J | -2.3194 | |
| 5 | G | J | 0.0000 | |
| 6 | H | J | -2.0609 | |
| 7 | F | J | 0.0000 | |
| 8 | K | J | -1.6519 | |
| 9 | F | J | 0.2992 | |
| 1 | F | K | -0.3953 | |
| 2 | K | K | -1.9881 | |
| 3 | F | K | 0.0000 | |
| 4 | K | K | -2.4974 | |
| 5 | G | K | 0.0000 | |
| 6 | H | K | -2.1862 | |
| 7 | F | K | 0.0000 | |
| 8 | K | K | -0.7827 | |
| 9 | F | K | 1.7684 | |
| 1 | F | L | -0.1166 | |
| 2 | K | L | -2.4455 | |
| 3 | F | L | 0.0000 | |
| 4 | K | L | -2.8969 | |
| 5 | G | L | 0.0000 | |
| 6 | H | L | -1.6258 | |
| 7 | F | L | 0.0000 | |
| 8 | K | L | -0.5020 | |
| 9 | F | L | 1.3493 | |
| 1 | F | M | 0.9495 | |
| 2 | K | M | -1.7955 | |
| 3 | F | M | -1.5845 | |
| 4 | K | M | -2.8761 | |
| 5 | G | M | 0.0000 | |
| 6 | H | M | -1.7634 | |
| 7 | F | M | 0.0000 | |
| 8 | K | M | -0.9410 | |
| 9 | F | M | 1.4411 | |
| 1 | F | N | 1.1179 | |
| 2 | K | N | -1.2489 | |
| 3 | F | N | -0.8424 | |
| 4 | K | N | -2.5653 | |
| 5 | G | N | -1.2178 | |
| 6 | H | N | -2.0240 | |
| 7 | F | N | -0.3964 | |
| 8 | K | N | -0.7464 | |
| 9 | F | N | 1.5368 | |
| 1 | F | O | -0.0018 | |
| 2 | K | O | -2.2333 | |
| 3 | F | O | 0.0000 | |
| 4 | K | O | -2.4596 | |
| 5 | G | O | -1.0542 | |
| 6 | H | O | -1.1904 | |
| 7 | F | O | 0.0000 | |
| 8 | K | O | -0.5745 | |
| 9 | F | O | 1.1304 | |
| 1 | F | P | -0.0369 | |
| 2 | K | P | -1.8813 | |
| 3 | F | P | 0.0000 | |
| 4 | K | P | -2.0490 | |
| 5 | G | P | 0.0000 | |
| 6 | H | P | -1.0863 | |
| 7 | F | P | 0.0000 | |
| 8 | K | P | -0.5749 | |
| 9 | F | P | 0.9820 | |
| 1 | F | Q | -0.0306 | |
| 2 | K | Q | -1.8875 | |
| 3 | F | Q | 0.0000 | |
| 4 | K | Q | -1.9571 | |
| 5 | G | Q | 0.0000 | |
| 6 | H | Q | -1.0482 | |
| 7 | F | Q | 0.0000 | |
| 8 | K | Q | -0.5708 | |
| 9 | F | Q | 0.8017 | |
| 1 | F | R | -0.0632 | |
| 2 | K | R | -1.6880 | |
| 3 | F | R | 0.0000 | |
| 4 | K | R | -1.7723 | |
| 5 | G | R | 0.0000 | |
| 6 | H | R | -1.1572 | |
| 7 | F | R | 0.0000 | |
| 8 | K | R | -0.2002 | |
| 9 | F | R | 1.4174 | |
| 1 | F | S | -0.0552 | |
| 2 | K | S | -1.7803 | |
| 3 | F | S | 0.0000 | |
| 4 | K | S | -2.1217 | |
| 5 | G | S | 0.0000 | |
| 6 | H | S | -1.0700 | |
| 7 | F | S | 0.0000 | |
| 8 | K | S | -0.5746 | |
| 9 | F | S | 0.6054 | |
| 1 | F | T | 0.4271 | |
| 2 | K | T | -1.1918 | |
| 3 | F | T | 0.0000 | |
| 4 | K | T | -2.0390 | |
| 5 | G | T | 0.0000 | |
| 6 | H | T | -1.1283 | |
| 7 | F | T | 0.0000 | |
| 8 | K | T | -0.0279 | |
| 9 | F | T | 1.7104 |