| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHPGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPDGHPLPDAPPPSPLYTPPPASSPTAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPEENVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9525 | |
| 2 | L | A | 1.9776 | |
| 3 | P | A | 0.6527 | |
| 4 | P | A | 0.3479 | |
| 5 | T | A | 0.0998 | |
| 6 | T | A | 0.1245 | |
| 7 | P | A | 0.1562 | |
| 8 | V | A | 1.2197 | |
| 9 | A | A | 0.0240 | |
| 10 | K | A | -1.1436 | |
| 11 | V | A | -0.3789 | |
| 12 | Q | A | -1.5177 | |
| 13 | S | A | -1.5968 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3985 | |
| 16 | E | A | -2.4296 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4671 | |
| 20 | P | A | 0.1110 | |
| 21 | T | A | 0.1162 | |
| 22 | S | A | -0.1724 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1038 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1534 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7260 | |
| 31 | R | A | -2.5994 | |
| 32 | L | A | -0.7491 | |
| 33 | L | A | 1.2207 | |
| 34 | T | A | 1.4547 | |
| 35 | V | A | 1.9938 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2235 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6145 | |
| 40 | K | A | -1.6256 | |
| 41 | D | A | -0.9139 | |
| 42 | I | A | 0.8265 | |
| 43 | V | A | 1.0220 | |
| 44 | K | A | -1.1931 | |
| 45 | N | A | -1.9317 | |
| 46 | G | A | -1.2372 | |
| 47 | K | A | -0.9462 | |
| 48 | V | A | 1.5065 | |
| 49 | V | A | 2.0674 | |
| 50 | V | A | 1.3013 | |
| 51 | P | A | 0.4890 | |
| 52 | K | A | -0.6165 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1671 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4864 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3015 | |
| 70 | K | A | -1.8176 | |
| 71 | F | A | -0.6752 | |
| 72 | A | A | -0.5853 | |
| 73 | L | A | -0.9405 | |
| 74 | P | A | -1.2673 | |
| 75 | Q | A | -2.4753 | |
| 76 | K | A | -3.0932 | |
| 77 | D | A | -2.9871 | |
| 78 | F | A | -1.6305 | |
| 79 | Y | A | -1.9065 | |
| 80 | D | A | -2.7513 | |
| 81 | P | A | -2.3509 | |
| 82 | E | A | -3.0713 | |
| 83 | K | A | -3.4365 | |
| 84 | E | A | -2.4943 | |
| 85 | R | A | -1.3104 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6652 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0023 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3776 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6818 | |
| 99 | G | A | -0.5550 | |
| 100 | P | A | -0.4346 | |
| 101 | L | A | -0.0235 | |
| 102 | G | A | -0.2481 | |
| 103 | K | A | -0.6818 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4470 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1530 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4181 | |
| 110 | L | A | 0.3012 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1299 | |
| 113 | K | A | -0.4566 | |
| 114 | L | A | -0.8628 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2780 | |
| 117 | T | A | -1.0952 | |
| 118 | E | A | -2.4778 | |
| 119 | N | A | -2.2946 | |
| 120 | P | A | -1.4980 | |
| 121 | T | A | -0.7769 | |
| 122 | A | A | -0.3986 | |
| 123 | P | A | -0.3085 | |
| 124 | V | A | -0.1967 | |
| 125 | H | A | -0.7775 | |
| 126 | P | A | -1.0507 | |
| 127 | G | A | -1.4414 | |
| 128 | A | A | -1.2702 | |
| 129 | D | A | -2.2402 | |
| 130 | D | A | -1.7641 | |
| 131 | R | A | -1.1375 | |
| 132 | V | A | 0.2350 | |
| 133 | A | A | 0.4385 | |
| 134 | F | A | 0.2802 | |
| 135 | S | A | -0.0681 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6965 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2601 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5694 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2603 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1067 | |
| 157 | D | A | 0.3467 | |
| 158 | I | A | 0.8535 | |
| 159 | A | A | 0.1211 | |
| 160 | E | A | -1.4735 | |
| 161 | P | A | -0.2317 | |
| 162 | C | A | 0.1858 | |
| 163 | P | A | -0.1705 | |
| 164 | G | A | -0.0740 | |
| 165 | L | A | 0.5950 | |
| 166 | P | A | -0.1094 | |
| 167 | P | A | -0.3380 | |
| 168 | G | A | -0.4136 | |
| 169 | A | A | -0.0062 | |
| 170 | C | A | 0.7596 | |
| 171 | P | A | 0.5524 | |
| 172 | P | A | 0.7773 | |
| 173 | I | A | 2.0305 | |
| 174 | Q | A | 0.8243 | |
| 175 | L | A | 1.4215 | |
| 176 | V | A | 0.8206 | |
| 177 | N | A | -0.3234 | |
| 178 | S | A | 0.0055 | |
| 179 | V | A | 0.3788 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3635 | |
| 182 | D | A | 0.0763 | |
| 183 | G | A | -0.1566 | |
| 184 | D | A | -0.5652 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1333 | |
| 190 | F | A | 0.0525 | |
| 191 | G | A | -0.1084 | |
| 192 | N | A | -0.2827 | |
| 193 | M | A | -0.1505 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4048 | |
| 197 | E | A | -2.6207 | |
| 198 | L | A | -1.2145 | |
| 199 | Q | A | -2.5352 | |
| 200 | Q | A | -3.3327 | |
| 201 | D | A | -3.5999 | |
| 202 | R | A | -3.3440 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2103 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3678 | |
| 211 | S | A | -1.8994 | |
| 212 | T | A | -1.4705 | |
| 213 | R | A | -2.1521 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1755 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2610 | |
| 220 | L | A | 0.4517 | |
| 221 | K | A | -1.4099 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9988 | |
| 224 | N | A | -1.6146 | |
| 225 | E | A | -1.3560 | |
| 226 | A | A | -0.6703 | |
| 227 | Y | A | -0.4559 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7247 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1365 | |
| 234 | F | A | 0.0390 | |
| 235 | G | A | -0.9656 | |
| 236 | R | A | -2.7951 | |
| 237 | R | A | -3.2229 | |
| 238 | E | A | -2.3242 | |
| 239 | Q | A | -0.2549 | |
| 240 | V | A | 1.4933 | |
| 241 | Y | A | 1.2304 | |
| 242 | A | A | 0.1747 | |
| 243 | R | A | -1.2970 | |
| 244 | H | A | -1.1336 | |
| 245 | F | A | -0.1344 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7951 | |
| 249 | S | A | -1.1767 | |
| 250 | G | A | -1.0990 | |
| 251 | P | A | -1.0584 | |
| 252 | D | A | -1.5257 | |
| 253 | G | A | -1.3234 | |
| 254 | H | A | -1.4853 | |
| 255 | P | A | -1.3641 | |
| 256 | L | A | -0.3506 | |
| 257 | P | A | -0.8078 | |
| 258 | D | A | -1.8651 | |
| 259 | A | A | -0.8747 | |
| 260 | P | A | -0.9197 | |
| 261 | P | A | -0.6156 | |
| 262 | P | A | -0.3141 | |
| 263 | S | A | -0.1663 | |
| 264 | P | A | 0.4281 | |
| 265 | L | A | 1.5207 | |
| 266 | Y | A | 0.6519 | |
| 267 | T | A | 0.0716 | |
| 268 | P | A | -0.4678 | |
| 269 | P | A | -0.1980 | |
| 270 | P | A | -0.4199 | |
| 271 | A | A | -0.0298 | |
| 272 | S | A | -0.1825 | |
| 273 | S | A | -0.0918 | |
| 274 | P | A | -0.1445 | |
| 275 | T | A | -0.0039 | |
| 276 | A | A | 0.3713 | |
| 277 | V | A | 1.0824 | |
| 278 | R | A | -0.1843 | |
| 279 | P | A | -0.5624 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.7096 | |
| 282 | D | A | -1.1100 | |
| 283 | Y | A | 0.7825 | |
| 284 | F | A | 0.6816 | |
| 285 | G | A | 0.1570 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9248 | |
| 291 | L | A | 1.6291 | |
| 292 | V | A | 0.6287 | |
| 293 | S | A | -0.1715 | |
| 294 | S | A | -1.0026 | |
| 295 | D | A | -1.8742 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.1052 | |
| 298 | L | A | -1.2536 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7121 | |
| 301 | R | A | -2.0216 | |
| 302 | P | A | -1.0225 | |
| 303 | F | A | -0.2157 | |
| 304 | W | A | -0.5394 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0857 | |
| 307 | R | A | -2.9245 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6562 | |
| 310 | G | A | -1.4274 | |
| 311 | N | A | -1.3990 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9435 | |
| 319 | N | A | -0.9069 | |
| 320 | E | A | -1.0637 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3583 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1563 | |
| 333 | N | A | 0.4265 | |
| 334 | F | A | 1.4786 | |
| 335 | T | A | 0.7445 | |
| 336 | I | A | 0.3656 | |
| 337 | S | A | -1.0648 | |
| 338 | Q | A | -1.9212 | |
| 339 | Q | A | -1.6489 | |
| 340 | L | A | 0.2153 | |
| 341 | S | A | -0.2698 | |
| 342 | T | A | -0.8293 | |
| 343 | P | A | -1.2875 | |
| 344 | E | A | -2.5115 | |
| 345 | E | A | -2.6416 | |
| 346 | N | A | -1.5118 | |
| 347 | V | A | 0.5367 | |
| 348 | Y | A | 0.8589 | |
| 349 | D | A | -0.2393 | |
| 350 | P | A | -0.6796 | |
| 351 | S | A | -0.5783 | |
| 352 | N | A | -0.8576 | |
| 353 | F | A | -1.1455 | |
| 354 | K | A | -2.0267 | |
| 355 | N | A | -1.8354 | |
| 356 | Y | A | -0.1441 | |
| 357 | L | A | 0.5671 | |
| 358 | R | A | 0.9077 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4633 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0177 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8950 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6635 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2994 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3221 | |
| 376 | L | A | -1.7531 | |
| 377 | D | A | -2.0280 | |
| 378 | P | A | -1.0602 | |
| 379 | G | A | -1.0182 | |
| 380 | V | A | -0.9267 | |
| 381 | L | A | -0.5371 | |
| 382 | A | A | -0.6549 | |
| 383 | H | A | -0.8417 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3890 | |
| 386 | T | A | -0.5598 | |
| 387 | M | A | -0.3255 | |
| 388 | N | A | -0.8690 | |
| 389 | P | A | -1.2733 | |
| 390 | T | A | -1.5782 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5665 | |
| 393 | E | A | -2.9836 | |
| 394 | N | A | -2.7495 | |
| 395 | W | A | -1.5921 | |
| 396 | N | A | -1.2876 | |
| 397 | L | A | -0.2854 | |
| 398 | G | A | 0.4913 | |
| 399 | F | A | 2.3933 | |
| 400 | V | A | 1.8156 | |
| 401 | P | A | 0.0369 | |
| 402 | P | A | -1.9838 | |
| 403 | K | A | -3.4787 | |
| 404 | E | A | -3.9677 | |
| 405 | R | A | -4.3630 | |
| 406 | E | A | -3.9680 | |
| 407 | D | A | -2.9446 | |
| 408 | P | A | -1.8027 | |
| 409 | Y | A | -0.9843 | |
| 410 | K | A | -2.0974 | |
| 411 | G | A | -0.6425 | |
| 412 | L | A | 0.6546 | |
| 413 | I | A | 1.5742 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4056 | |
| 416 | E | A | -1.6979 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8635 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9044 | |
| 421 | E | A | -2.5063 | |
| 422 | R | A | -2.0676 | |
| 423 | F | A | -1.0150 | |
| 424 | S | A | -1.3027 | |
| 425 | Q | A | -1.7800 | |
| 426 | D | A | -2.8605 | |
| 427 | L | A | -1.9486 | |
| 428 | D | A | -2.7233 | |
| 429 | Q | A | -2.5833 | |
| 430 | F | A | -1.4081 | |
| 431 | A | A | -0.8399 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.4965 | |
| 435 | K | A | -0.6652 | |
| 436 | F | A | 0.1856 | |
| 437 | L | A | 1.0584 | |
| 438 | Y | A | 0.8493 | |
| 439 | Q | A | -0.2516 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine