| Chain sequence(s) |
A: RFHLLHWHGNYLQHGCRNWGHYISVPIQPQDERYLSKTGRTDIANLAEEFKDHLVPD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:34)
[INFO] Main: Simulation completed successfully. (00:01:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -0.5652 | |
| 2 | F | A | 1.4244 | |
| 3 | H | A | 0.5190 | |
| 4 | L | A | 1.8618 | |
| 5 | L | A | 1.7818 | |
| 6 | H | A | 0.6144 | |
| 7 | W | A | 1.5901 | |
| 8 | H | A | 0.7663 | |
| 9 | G | A | -0.0049 | |
| 10 | N | A | -0.4272 | |
| 11 | Y | A | 0.7287 | |
| 12 | L | A | 0.3803 | |
| 13 | Q | A | -1.4417 | |
| 14 | H | A | -1.6147 | |
| 15 | G | A | -0.7487 | |
| 16 | C | A | -0.6567 | |
| 17 | R | A | -2.3146 | |
| 18 | N | A | -1.2942 | |
| 19 | W | A | 0.4978 | |
| 20 | G | A | 0.1942 | |
| 21 | H | A | 0.0961 | |
| 22 | Y | A | 1.9761 | |
| 23 | I | A | 2.9554 | |
| 24 | S | A | 2.0344 | |
| 25 | V | A | 2.4558 | |
| 26 | P | A | 1.6245 | |
| 27 | I | A | 0.5319 | |
| 28 | Q | A | -1.3468 | |
| 29 | P | A | -1.8994 | |
| 30 | Q | A | -2.4860 | |
| 31 | D | A | -2.4016 | |
| 32 | E | A | -3.0580 | |
| 33 | R | A | -3.0999 | |
| 34 | Y | A | -1.4291 | |
| 35 | L | A | -1.8659 | |
| 36 | S | A | -2.3389 | |
| 37 | K | A | -2.4410 | |
| 38 | T | A | -1.3945 | |
| 39 | G | A | -1.6097 | |
| 40 | R | A | -2.1342 | |
| 41 | T | A | -1.9323 | |
| 42 | D | A | -1.8127 | |
| 43 | I | A | -0.6484 | |
| 44 | A | A | -1.6673 | |
| 45 | N | A | -2.2921 | |
| 46 | L | A | -0.5422 | |
| 47 | A | A | -1.4113 | |
| 48 | E | A | -3.1158 | |
| 49 | E | A | -2.8327 | |
| 50 | F | A | -1.4417 | |
| 51 | K | A | -2.5702 | |
| 52 | D | A | -2.8797 | |
| 53 | H | A | -1.7492 | |
| 54 | L | A | 0.4875 | |
| 55 | V | A | 0.8196 | |
| 56 | P | A | -0.7186 | |
| 57 | D | A | -1.6883 |