| Chain sequence(s) |
A: FEFEFEGKGH
B: FEFEFEGKGH input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:38)
[INFO] Main: Simulation completed successfully. (00:00:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.8456 | |
| 2 | E | A | -0.5857 | |
| 3 | F | A | 0.9385 | |
| 4 | E | A | -1.3334 | |
| 5 | F | A | 0.1954 | |
| 6 | E | A | -2.6684 | |
| 7 | G | A | -2.5929 | |
| 8 | K | A | -3.8794 | |
| 9 | G | A | -2.8882 | |
| 10 | H | A | -2.2198 | |
| 1 | F | B | 1.7940 | |
| 2 | E | B | -0.7702 | |
| 3 | F | B | 0.2297 | |
| 4 | E | B | -1.6524 | |
| 5 | F | B | -0.0858 | |
| 6 | E | B | -2.7092 | |
| 7 | G | B | -2.3577 | |
| 8 | K | B | -3.7530 | |
| 9 | G | B | -2.4726 | |
| 10 | H | B | -2.2269 |