Project name: query_structure

Status: done

Started: 2026-03-16 19:57:10
Settings
Chain sequence(s) A: CGESCAMISFCFTEVIGCSCKNKVCYLNSIS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:13)
Show buried residues

Minimal score value
-2.5928
Maximal score value
3.1147
Average score
0.4711
Total score value
14.6053

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.4770
2 G A -0.2598
3 E A -0.2723
4 S A -0.2829
5 C A 0.0000
6 A A -0.0009
7 M A 1.4492
8 I A 1.7210
9 S A 0.5898
10 F A 2.1380
11 C A 0.0000
12 F A 2.8139
13 T A 2.0276
14 E A 1.9906
15 V A 3.1147
16 I A 2.8967
17 G A 1.2249
18 C A 0.0000
19 S A 0.4534
20 C A -0.5108
21 K A -2.1818
22 N A -2.5928
23 K A -2.0489
24 V A -1.0604
25 C A 0.0000
26 Y A 0.1471
27 L A 0.6030
28 N A -0.4685
29 S A 0.2229
30 I A 1.6731
31 S A 0.7415
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Laboratory of Theory of Biopolymers 2018