Project name: Y32N

Status: done

Started: 2025-12-22 05:04:36
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Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAVSGLSLTSNSVNWIRQAPGKGLEWVGLIWSNGDTDYNSAIKSRFTISRDTSKSTVYLQMNSLRAEDTAVYYCAREYYGYFDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCLASEGISSNLAWYQQKPGKAPKLLIYGANSLQTGVPSRFSGSGSATDYTLTISSLQPEDFATYYCQQSYKFPNTFGQGTKVEVK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:54)
Show buried residues

Minimal score value
-2.6604
Maximal score value
1.734
Average score
-0.5274
Total score value
-117.6089

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0115
2 V H -1.0358
3 Q H -0.9722
4 L H 0.0000
5 V H 0.9362
6 E H 0.0000
7 S H -0.1637
8 G H -0.4077
9 G H 0.2537
11 G H 0.8337
12 L H 1.3810
13 V H -0.0205
14 Q H -1.3236
15 P H -1.5961
16 G H -1.4162
17 G H -1.1534
18 S H -1.0974
19 L H -0.6848
20 R H -1.4557
21 L H 0.0000
22 S H -0.2417
23 C H 0.0000
24 A H -0.0409
25 V H 0.0000
26 S H -0.6601
27 G H -1.1419
28 L H -0.5412
29 S H -0.2568
30 L H 0.0000
35 T H -0.6375
36 S H -0.5136
37 N H -0.4066
38 S H -0.3902
39 V H 0.0000
40 N H 0.0000
41 W H 0.0000
42 I H 0.0000
43 R H 0.0000
44 Q H -0.5506
45 A H -0.9946
46 P H -0.7895
47 G H -1.4487
48 K H -2.3322
49 G H -1.5619
50 L H 0.0000
51 E H -0.9358
52 W H 0.0000
53 V H 0.0000
54 G H 0.0000
55 L H 0.0000
56 I H 0.0000
57 W H -0.9875
58 S H -1.1600
59 N H -1.8811
63 G H -1.7255
64 D H -2.2697
65 T H -1.2119
66 D H -0.7814
67 Y H -0.4979
68 N H -0.7591
69 S H -0.8966
70 A H -0.5537
71 I H 0.0000
72 K H -1.8376
74 S H -1.1678
75 R H -1.0362
76 F H 0.0000
77 T H -0.7364
78 I H 0.0000
79 S H -0.6008
80 R H -0.8138
81 D H -1.1377
82 T H -1.0369
83 S H -1.2264
84 K H -2.0005
85 S H -1.1508
86 T H -0.6584
87 V H 0.0000
88 Y H -0.4466
89 L H 0.0000
90 Q H -0.9889
91 M H 0.0000
92 N H -1.1921
93 S H -1.1864
94 L H 0.0000
95 R H -2.1760
96 A H -1.6322
97 E H -2.1794
98 D H 0.0000
99 T H -0.3055
100 A H 0.0000
101 V H 0.9305
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0804
107 E H 0.2722
108 Y H 0.9429
109 Y H 1.4089
113 G H 0.5629
114 Y H 0.0000
115 F H 0.0000
116 D H 0.0285
117 Y H 0.1243
118 W H -0.3384
119 G H 0.0000
120 Q H -1.2698
121 G H -0.2261
122 T H 0.6269
123 L H 1.7340
124 V H 0.0000
125 T H 0.3878
126 V H 0.0000
127 S H -0.5069
128 S H -0.5464
1 D L -2.1872
2 I L 0.0000
3 Q L -1.8133
4 M L 0.0000
5 T L -0.6285
6 Q L 0.0000
7 S L -0.4153
8 P L -0.4883
9 S L -0.7794
10 S L -0.8992
11 L L -0.7029
12 S L -0.9841
13 A L -0.8551
14 S L -0.7082
15 V L 0.2103
16 G L -0.6045
17 D L -1.6429
18 R L -2.2556
19 V L 0.0000
20 T L -0.6039
21 I L 0.0000
22 T L -0.4117
23 C L 0.0000
24 L L -0.4945
25 A L 0.0000
26 S L -1.2590
27 E L -1.2513
28 G L -0.8300
29 I L 0.0000
36 S L -0.7799
37 S L -1.0822
38 N L -1.0060
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.9321
44 Q L 0.0000
45 K L -1.5747
46 P L -1.0770
47 G L -1.6735
48 K L -2.6604
49 A L -1.6598
50 P L 0.0000
51 K L -1.8967
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.0468
56 G L -0.6990
57 A L 0.0000
65 N L -1.4754
66 S L -0.4867
67 L L 0.0047
68 Q L -0.3405
69 T L -0.2223
70 G L -0.4304
71 V L -0.3174
72 P L -0.3111
74 S L -0.3891
75 R L -0.7452
76 F L 0.0000
77 S L -0.5485
78 G L -0.7518
79 S L -1.1613
80 G L -1.3461
83 S L -1.2553
84 A L -0.9719
85 T L -1.1392
86 D L -1.9079
87 Y L 0.0000
88 T L -0.7172
89 L L 0.0000
90 T L -0.5665
91 I L 0.0000
92 S L -1.2103
93 S L -1.1159
94 L L 0.0000
95 Q L -0.7534
96 P L -0.8365
97 E L -1.5033
98 D L 0.0000
99 F L -0.0403
100 A L 0.0000
101 T L -0.6689
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L 0.1366
108 Y L 0.1983
109 K L -0.4761
114 F L 0.4285
115 P L -0.0696
116 N L 0.0000
117 T L -0.6739
118 F L 0.0000
119 G L 0.0000
120 Q L -1.5799
121 G L 0.0000
122 T L 0.0000
123 K L -1.1950
124 V L 0.0000
125 E L -1.1150
126 V L -0.5022
127 K L -1.4593
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Laboratory of Theory of Biopolymers 2018