| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAVSGLSLTSNSVNWIRQAPGKGLEWVGLIWSNGDTDYNSAIKSRFTISRDTSKSTVYLQMNSLRAEDTAVYYCAREYYGYFDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCLASEGISSNLAWYQQKPGKAPKLLIYGANSLQTGVPSRFSGSGSATDYTLTISSLQPEDFATYYCQQSYKFPNTFGQGTKVEVK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:52)
[INFO] Main: Simulation completed successfully. (00:01:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0115 | |
| 2 | V | H | -1.0358 | |
| 3 | Q | H | -0.9722 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.9362 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1637 | |
| 8 | G | H | -0.4077 | |
| 9 | G | H | 0.2537 | |
| 11 | G | H | 0.8337 | |
| 12 | L | H | 1.3810 | |
| 13 | V | H | -0.0205 | |
| 14 | Q | H | -1.3236 | |
| 15 | P | H | -1.5961 | |
| 16 | G | H | -1.4162 | |
| 17 | G | H | -1.1534 | |
| 18 | S | H | -1.0974 | |
| 19 | L | H | -0.6848 | |
| 20 | R | H | -1.4557 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2417 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0409 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -0.6601 | |
| 27 | G | H | -1.1419 | |
| 28 | L | H | -0.5412 | |
| 29 | S | H | -0.2568 | |
| 30 | L | H | 0.0000 | |
| 35 | T | H | -0.6375 | |
| 36 | S | H | -0.5136 | |
| 37 | N | H | -0.4066 | |
| 38 | S | H | -0.3902 | |
| 39 | V | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5506 | |
| 45 | A | H | -0.9946 | |
| 46 | P | H | -0.7895 | |
| 47 | G | H | -1.4487 | |
| 48 | K | H | -2.3322 | |
| 49 | G | H | -1.5619 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9358 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | L | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | W | H | -0.9875 | |
| 58 | S | H | -1.1600 | |
| 59 | N | H | -1.8811 | |
| 63 | G | H | -1.7255 | |
| 64 | D | H | -2.2697 | |
| 65 | T | H | -1.2119 | |
| 66 | D | H | -0.7814 | |
| 67 | Y | H | -0.4979 | |
| 68 | N | H | -0.7591 | |
| 69 | S | H | -0.8966 | |
| 70 | A | H | -0.5537 | |
| 71 | I | H | 0.0000 | |
| 72 | K | H | -1.8376 | |
| 74 | S | H | -1.1678 | |
| 75 | R | H | -1.0362 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7364 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.6008 | |
| 80 | R | H | -0.8138 | |
| 81 | D | H | -1.1377 | |
| 82 | T | H | -1.0369 | |
| 83 | S | H | -1.2264 | |
| 84 | K | H | -2.0005 | |
| 85 | S | H | -1.1508 | |
| 86 | T | H | -0.6584 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.4466 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.9889 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.1921 | |
| 93 | S | H | -1.1864 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.1760 | |
| 96 | A | H | -1.6322 | |
| 97 | E | H | -2.1794 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3055 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.9305 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0804 | |
| 107 | E | H | 0.2722 | |
| 108 | Y | H | 0.9429 | |
| 109 | Y | H | 1.4089 | |
| 113 | G | H | 0.5629 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.0285 | |
| 117 | Y | H | 0.1243 | |
| 118 | W | H | -0.3384 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2698 | |
| 121 | G | H | -0.2261 | |
| 122 | T | H | 0.6269 | |
| 123 | L | H | 1.7340 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3878 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5069 | |
| 128 | S | H | -0.5464 | |
| 1 | D | L | -2.1872 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.8133 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.6285 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.4153 | |
| 8 | P | L | -0.4883 | |
| 9 | S | L | -0.7794 | |
| 10 | S | L | -0.8992 | |
| 11 | L | L | -0.7029 | |
| 12 | S | L | -0.9841 | |
| 13 | A | L | -0.8551 | |
| 14 | S | L | -0.7082 | |
| 15 | V | L | 0.2103 | |
| 16 | G | L | -0.6045 | |
| 17 | D | L | -1.6429 | |
| 18 | R | L | -2.2556 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6039 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.4117 | |
| 23 | C | L | 0.0000 | |
| 24 | L | L | -0.4945 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.2590 | |
| 27 | E | L | -1.2513 | |
| 28 | G | L | -0.8300 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.7799 | |
| 37 | S | L | -1.0822 | |
| 38 | N | L | -1.0060 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.9321 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.5747 | |
| 46 | P | L | -1.0770 | |
| 47 | G | L | -1.6735 | |
| 48 | K | L | -2.6604 | |
| 49 | A | L | -1.6598 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.8967 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.0468 | |
| 56 | G | L | -0.6990 | |
| 57 | A | L | 0.0000 | |
| 65 | N | L | -1.4754 | |
| 66 | S | L | -0.4867 | |
| 67 | L | L | 0.0047 | |
| 68 | Q | L | -0.3405 | |
| 69 | T | L | -0.2223 | |
| 70 | G | L | -0.4304 | |
| 71 | V | L | -0.3174 | |
| 72 | P | L | -0.3111 | |
| 74 | S | L | -0.3891 | |
| 75 | R | L | -0.7452 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.5485 | |
| 78 | G | L | -0.7518 | |
| 79 | S | L | -1.1613 | |
| 80 | G | L | -1.3461 | |
| 83 | S | L | -1.2553 | |
| 84 | A | L | -0.9719 | |
| 85 | T | L | -1.1392 | |
| 86 | D | L | -1.9079 | |
| 87 | Y | L | 0.0000 | |
| 88 | T | L | -0.7172 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5665 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.2103 | |
| 93 | S | L | -1.1159 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7534 | |
| 96 | P | L | -0.8365 | |
| 97 | E | L | -1.5033 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.0403 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.6689 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.1366 | |
| 108 | Y | L | 0.1983 | |
| 109 | K | L | -0.4761 | |
| 114 | F | L | 0.4285 | |
| 115 | P | L | -0.0696 | |
| 116 | N | L | 0.0000 | |
| 117 | T | L | -0.6739 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.5799 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.1950 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.1150 | |
| 126 | V | L | -0.5022 | |
| 127 | K | L | -1.4593 |