Chain sequence(s) |
A: MGRKKRRQRRRPPQGLFEAIEGFIENGWEGMIDGWYGNNTHDLVGDVRLAGVHHHHHHPKKKRKVGGRFLVHRYSVLQSVASSRRHKRFAGV
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:53) [INFO] Main: Simulation completed successfully. (00:00:54) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 0.1888 | |
2 | G | A | -1.5237 | |
3 | R | A | -3.3676 | |
4 | K | A | -4.1974 | |
5 | K | A | -4.6580 | |
6 | R | A | -4.9262 | |
7 | R | A | -4.8373 | |
8 | Q | A | -4.5872 | |
9 | R | A | -4.6981 | |
10 | R | A | -4.3384 | |
11 | R | A | -3.7840 | |
12 | P | A | -2.3685 | |
13 | P | A | -1.1665 | |
14 | Q | A | -1.3134 | |
15 | G | A | 0.4916 | |
16 | L | A | 1.9751 | |
17 | F | A | 2.0102 | |
18 | E | A | 0.0260 | |
19 | A | A | 0.8249 | |
20 | I | A | 1.6261 | |
21 | E | A | -0.7908 | |
22 | G | A | -0.8327 | |
23 | F | A | 0.4581 | |
24 | I | A | 0.4798 | |
25 | E | A | -1.8433 | |
26 | N | A | -2.1220 | |
27 | G | A | -0.6529 | |
28 | W | A | -0.2080 | |
29 | E | A | -1.9532 | |
30 | G | A | -1.3326 | |
31 | M | A | -0.1258 | |
32 | I | A | 0.2384 | |
33 | D | A | -1.3462 | |
34 | G | A | -0.5530 | |
35 | W | A | 0.7428 | |
36 | Y | A | 0.6959 | |
37 | G | A | -1.1578 | |
38 | N | A | -2.1263 | |
39 | N | A | -1.8084 | |
40 | T | A | -1.2649 | |
41 | H | A | -2.1670 | |
42 | D | A | -2.2630 | |
43 | L | A | 0.0306 | |
44 | V | A | -0.1356 | |
45 | G | A | -1.1158 | |
46 | D | A | -1.2407 | |
47 | V | A | 0.7852 | |
48 | R | A | -0.5340 | |
49 | L | A | 0.8908 | |
50 | A | A | 0.5505 | |
51 | G | A | 0.3159 | |
52 | V | A | 0.7884 | |
53 | H | A | -1.0854 | |
54 | H | A | -1.9456 | |
55 | H | A | -2.3586 | |
56 | H | A | -2.6205 | |
57 | H | A | -2.6575 | |
58 | H | A | -2.6467 | |
59 | P | A | -2.5950 | |
60 | K | A | -3.8003 | |
61 | K | A | -4.2390 | |
62 | K | A | -4.1441 | |
63 | R | A | -3.7753 | |
64 | K | A | -2.5739 | |
65 | V | A | -0.2893 | |
66 | G | A | -0.6469 | |
67 | G | A | -0.8004 | |
68 | R | A | -0.4180 | |
69 | F | A | 1.9049 | |
70 | L | A | 2.0107 | |
71 | V | A | 1.5315 | |
72 | H | A | -0.2451 | |
73 | R | A | -0.8285 | |
74 | Y | A | 1.0325 | |
75 | S | A | 0.9889 | |
76 | V | A | 2.2561 | |
77 | L | A | 2.2541 | |
78 | Q | A | 0.2611 | |
79 | S | A | 0.6423 | |
80 | V | A | 1.2870 | |
81 | A | A | -0.0467 | |
82 | S | A | -1.0547 | |
83 | S | A | -1.6487 | |
84 | R | A | -3.3595 | |
85 | R | A | -3.8840 | |
86 | H | A | -3.3669 | |
87 | K | A | -3.3675 | |
88 | R | A | -2.5947 | |
89 | F | A | 0.3473 | |
90 | A | A | 0.2785 | |
91 | G | A | 0.7436 | |
92 | V | A | 1.7747 |