| Chain sequence(s) |
B: SPYKNWSPEEVKKYVEEVLETINTTSDSDNPYTKYMEFEFYYWWFQETDIPKEAKKEVMPELFRKRWELYQQVT
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:38)
[INFO] Main: Simulation completed successfully. (00:02:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.0905 | |
| 2 | P | B | -1.0583 | |
| 3 | Y | B | -1.4228 | |
| 4 | K | B | -2.5008 | |
| 5 | N | B | -2.2504 | |
| 6 | W | B | -1.6675 | |
| 7 | S | B | -2.0951 | |
| 8 | P | B | -3.2160 | |
| 9 | E | B | -3.3175 | |
| 10 | E | B | -2.8759 | |
| 11 | V | B | 0.0000 | |
| 12 | K | B | -3.7981 | |
| 13 | K | B | -3.8469 | |
| 14 | Y | B | -2.4634 | |
| 15 | V | B | 0.0000 | |
| 16 | E | B | -3.7521 | |
| 17 | E | B | -3.5988 | |
| 18 | V | B | -2.0722 | |
| 19 | L | B | -2.3525 | |
| 20 | E | B | -3.2357 | |
| 21 | T | B | -2.0173 | |
| 22 | I | B | 0.0000 | |
| 23 | N | B | -2.2070 | |
| 24 | T | B | -1.5270 | |
| 25 | T | B | -1.3822 | |
| 26 | S | B | -2.2576 | |
| 27 | D | B | -2.8243 | |
| 28 | S | B | -2.3712 | |
| 29 | D | B | -2.9676 | |
| 30 | N | B | -2.3678 | |
| 31 | P | B | -1.0204 | |
| 32 | Y | B | -0.0766 | |
| 33 | T | B | -1.0278 | |
| 34 | K | B | -1.4350 | |
| 35 | Y | B | 0.0000 | |
| 36 | M | B | 0.3239 | |
| 37 | E | B | -1.0920 | |
| 38 | F | B | 0.0000 | |
| 39 | E | B | 0.4538 | |
| 40 | F | B | 1.3222 | |
| 41 | Y | B | 0.0000 | |
| 42 | Y | B | 0.5196 | |
| 43 | W | B | 0.9626 | |
| 44 | W | B | 0.1995 | |
| 45 | F | B | 0.0000 | |
| 46 | Q | B | -1.3375 | |
| 47 | E | B | -2.0128 | |
| 48 | T | B | -1.5171 | |
| 49 | D | B | -2.1258 | |
| 50 | I | B | 0.0000 | |
| 51 | P | B | -2.4367 | |
| 52 | K | B | -3.5373 | |
| 53 | E | B | -3.7024 | |
| 54 | A | B | 0.0000 | |
| 55 | K | B | -3.0902 | |
| 56 | K | B | -4.0337 | |
| 57 | E | B | -4.0072 | |
| 58 | V | B | 0.0000 | |
| 59 | M | B | -1.9501 | |
| 60 | P | B | -1.8533 | |
| 61 | E | B | -2.6075 | |
| 62 | L | B | 0.0000 | |
| 63 | F | B | -0.5994 | |
| 64 | R | B | -2.0927 | |
| 65 | K | B | -2.0508 | |
| 66 | R | B | -1.2712 | |
| 67 | W | B | -1.3396 | |
| 68 | E | B | -2.3974 | |
| 69 | L | B | -1.2521 | |
| 70 | Y | B | -0.7505 | |
| 71 | Q | B | -1.7868 | |
| 72 | Q | B | -1.5304 | |
| 73 | V | B | -0.2032 | |
| 74 | T | B | -0.2630 |