Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASSPQWQKSKFLAGLWFRQAPGQGLEAVASYGENKETGLGSISRDPRFTISRDNSKNTLYLQMNSLRAEDTAVYYCALGPRLMEDKEQFQLATHWGQGTLVTVSS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28) [INFO] Main: Simulation completed successfully. (00:01:29) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.3941 | |
2 | V | A | -1.0034 | |
3 | Q | A | -1.1256 | |
4 | L | A | 0.0000 | |
5 | V | A | 0.9526 | |
6 | E | A | 0.3140 | |
7 | S | A | -0.1572 | |
8 | G | A | -0.7266 | |
9 | G | A | 0.0740 | |
10 | G | A | 0.8279 | |
11 | L | A | 1.2951 | |
12 | V | A | 0.0000 | |
13 | Q | A | -1.4786 | |
14 | P | A | -1.8098 | |
15 | G | A | -1.5994 | |
16 | G | A | -1.1759 | |
17 | S | A | -1.6259 | |
18 | L | A | -1.1786 | |
19 | R | A | -2.3374 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.5221 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.1840 | |
24 | A | A | -0.6093 | |
25 | S | A | -0.7461 | |
26 | S | A | 0.0000 | |
27 | P | A | -1.6478 | |
28 | Q | A | -2.3012 | |
29 | W | A | 0.0000 | |
30 | Q | A | -3.4095 | |
31 | K | A | -3.1753 | |
32 | S | A | -2.4133 | |
33 | K | A | -2.5528 | |
34 | F | A | -0.4429 | |
35 | L | A | -0.7804 | |
36 | A | A | -0.0156 | |
37 | G | A | 0.0000 | |
38 | L | A | 0.6424 | |
39 | W | A | 0.0000 | |
40 | F | A | 0.3154 | |
41 | R | A | -0.1024 | |
42 | Q | A | -0.4669 | |
43 | A | A | -0.9208 | |
44 | P | A | -1.0169 | |
45 | G | A | -1.1947 | |
46 | Q | A | -1.6510 | |
47 | G | A | -0.8068 | |
48 | L | A | 0.4849 | |
49 | E | A | -0.4716 | |
50 | A | A | -0.2873 | |
51 | V | A | 0.0000 | |
52 | A | A | 0.0000 | |
53 | S | A | 0.2865 | |
54 | Y | A | 0.1387 | |
55 | G | A | 0.0000 | |
56 | E | A | -2.2361 | |
57 | N | A | 0.0000 | |
58 | K | A | -2.9415 | |
59 | E | A | -2.8481 | |
60 | T | A | -1.7113 | |
61 | G | A | -1.5724 | |
62 | L | A | -0.4346 | |
63 | G | A | -0.4417 | |
64 | S | A | 0.1784 | |
65 | I | A | 0.7544 | |
66 | S | A | -0.5901 | |
67 | R | A | -1.8976 | |
68 | D | A | -1.2966 | |
69 | P | A | -0.9929 | |
70 | R | A | -1.3244 | |
71 | F | A | 0.0000 | |
72 | T | A | -0.9098 | |
73 | I | A | 0.0000 | |
74 | S | A | -0.4660 | |
75 | R | A | -1.3922 | |
76 | D | A | -2.0580 | |
77 | N | A | -3.1534 | |
78 | S | A | -2.2880 | |
79 | K | A | -2.6352 | |
80 | N | A | -2.4469 | |
81 | T | A | 0.0000 | |
82 | L | A | 0.0000 | |
83 | Y | A | -0.7168 | |
84 | L | A | 0.0000 | |
85 | Q | A | -1.7606 | |
86 | M | A | 0.0000 | |
87 | N | A | -2.1888 | |
88 | S | A | -1.5620 | |
89 | L | A | 0.0000 | |
90 | R | A | -2.6389 | |
91 | A | A | -1.8620 | |
92 | E | A | -2.3073 | |
93 | D | A | 0.0000 | |
94 | T | A | -0.5128 | |
95 | A | A | 0.0000 | |
96 | V | A | 0.7502 | |
97 | Y | A | 0.0000 | |
98 | Y | A | 0.5091 | |
99 | C | A | 0.0000 | |
100 | A | A | 0.0000 | |
101 | L | A | 0.0000 | |
102 | G | A | 0.0000 | |
103 | P | A | 0.3233 | |
104 | R | A | 0.2297 | |
105 | L | A | 0.2831 | |
106 | M | A | -0.3370 | |
107 | E | A | -2.6760 | |
108 | D | A | -3.6566 | |
109 | K | A | -3.7388 | |
110 | E | A | -3.3293 | |
111 | Q | A | -1.8861 | |
112 | F | A | 0.7034 | |
113 | Q | A | 0.2494 | |
114 | L | A | 1.1559 | |
115 | A | A | 0.0000 | |
116 | T | A | 0.1034 | |
117 | H | A | -0.1764 | |
118 | W | A | 0.2595 | |
119 | G | A | -0.1536 | |
120 | Q | A | -0.8737 | |
121 | G | A | 0.0601 | |
122 | T | A | 0.5457 | |
123 | L | A | 1.6445 | |
124 | V | A | 0.0000 | |
125 | T | A | 0.2868 | |
126 | V | A | 0.0000 | |
127 | S | A | -0.7538 | |
128 | S | A | -0.5226 |